Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04296 ATGTGTGAGTTCAAGGTTCATGTTTCATCATCATCCCCATCTTCATCTTCCAGTACTAATGCCATTTATCATGTAATTAATGTCGGTGATAATCTTACACTTGGTTCTTGTTCTCGTCCAACATACAAACCGAACCGGCCACAACAAGCATTATTGGATTTGTCTTCGTATCCCTATGAAACTAATGTTTGTCTCCACCTATCTCTAGCCTTTTGTAACTGCATACAAATTGCTCAACGAGAAACTAATGTTGCAACAAGTTCTGATTCATCAACCAGCCGTGATGATCCATGGAAGATCAAGAAGGTGCTCACAGCAAGTGATCTTGGTAATAATAGCAGGCTTTTGTTGAAGAAAGAATTGGCTAAGAGATGGGTGGTTCCTTTTGTGGACAAAGCTGAAGCTGAAAAAGATGGAGTGAAAGTTCCGGTGTTTGATGTTGACACTCAAACTCTCTGTTCTCTTGTGTTCAAGATATGGCCTTCGAACGGAAGTCACGTTTTCATCGATACGTGGATCAAGGATTTTGTAGGTAAAAGGAACTTAAAGGCTGGAGATGAGATTGGTCTTAAATGGGATCATGACAAGAACAAATTTGATTTTTTTGTTCTTCGTAGGGCTTGA 624 0.3974 MCEFKVHVSSSSPSSSSSTNAIYHVINVGDNLTLGSCSRPTYKPNRPQQALLDLSSYPYETNVCLHLSLAFCNCIQIAQRETNVATSSDSSTSRDDPWKIKKVLTASDLGNNSRLLLKKELAKRWVVPFVDKAEAEKDGVKVPVFDVDTQTLCSLVFKIWPSNGSHVFIDTWIKDFVGKRNLKAGDEIGLKWDHDKNKFDFFVLRRA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04296 207 CDD B3_DNA 98 205 IPR003340 GO:0003677
Vifa4g04296 207 Gene3D - 93 206 IPR015300 -
Vifa4g04296 207 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 68 206 - -
Vifa4g04296 207 SUPERFAMILY DNA-binding pseudobarrel domain 95 205 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04296 Vifa-Chr4 1356464102 1356464725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04296 100 188 B3 DNA Binding Superfamily AT3G24650 31.461 4.68e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04296 - - psat:127081321 187.193