Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04239 ATGCAAATACATTTCTCCATTAAACTTCTTGTTAGTTTCTTGCTCTTGTTCATTTCCCCTCTGTTTCTTTCATTCTCAACTGCCGCACAGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAGCCCTCTGCGTCCAAACACTCTCCAACCAAGTCAGTCCCACGGCGAAGCCCTTAGACCTGGCTCAGGCCACCGTTAAAGCCAGTCTCGCCCGCACTCTCACCCTTTCCGTTTACCTCAAGAACACTCTAAAGTCACAGCTGACAGTTGGGTCTAAAGGTAACAAGAGAAAGCGAGTTGCATTGAGTGACTGTGTTGCTCAGATTTCCGATTCTGTTCTTGAGTTGAACCGGACGTTGAACGAGTTACGGAAGCTTCAGATGGGAACGTTCGAGTGGCAAATGAGTAACGCTCAGACATGGGCTAGTACTGCAATAACAAACGGTAACGCGTGTATCAACGGTTTGAATAGGAGTGACGCAGAAGAGAAGATGAAGGTGGAGGTGAAACGTAGGGTTACGGAAGTATCCATGTTTACAAGTAACGCTCTCTACTTTATCATTCGTCTCGGTGATAGCAGGAATCCAAAGCCTCACTCCAATTCCAATAACTGA 624 0.4679 MQIHFSIKLLVSFLLLFISPLFLSFSTAAQQDLLRSSCAQARYPALCVQTLSNQVSPTAKPLDLAQATVKASLARTLTLSVYLKNTLKSQLTVGSKGNKRKRVALSDCVAQISDSVLELNRTLNELRKLQMGTFEWQMSNAQTWASTAITNGNACINGLNRSDAEEKMKVEVKRRVTEVSMFTSNALYFIIRLGDSRNPKPHSNSNN 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04239 207 Coils Coil 109 129 - -
Vifa4g04239 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 193 IPR035513 -
Vifa4g04239 207 Pfam Plant invertase/pectin methylesterase inhibitor 33 187 IPR006501 GO:0004857
Vifa4g04239 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 190 IPR035513 -
Vifa4g04239 207 SMART PMEI_2 29 189 IPR006501 GO:0004857
Vifa4g04239 207 CDD PMEI-like_3 36 193 - -
Vifa4g04239 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 188 - -
Vifa4g04239 207 NCBIfam pectinesterase inhibitor domain 5 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04239 Vifa-Chr4 1350422529 1350423152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04239 33 196 Carbohydrate Esterase AT3G14310 29.518 2.95e-14 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04239 4 1350422529 1350423152 Vifa4g04239 4 1350422529 1350423152 ECH