Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04238 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCTGTGCCAACAAACCCTGCCATATTTTTTTCGGAAACACCGATTGGGTTTATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCACTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGCGGGCAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAAAAAAGTGGGACATCGGAGAACGATATCATGGTTGCTGCACATGTTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGGATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAATGGAATGTAGTTAG 861 0.3751 MDPNHFHYQQAMFNYMSNYQNPNPQNSQFPSVPTNPAIFFSETPIGFMSGCQVPPVSTQVGTEKEERDPIVGVDQKAESFWLRITANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDIMVAAHVFFAQDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNAMQDARIKRAAAMERLAQCKEDELELKAMDIIMKDTSTMNDNQRDIHEKYCNKMKKMECS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04238 286 MobiDBLite consensus disorder prediction 211 226 - -
Vifa4g04238 286 Pfam No apical meristem-associated C-terminal domain 152 270 IPR029466 -
Vifa4g04238 286 MobiDBLite consensus disorder prediction 173 208 - -
Vifa4g04238 286 MobiDBLite consensus disorder prediction 173 226 - -
Vifa4g04238 286 Coils Coil 228 248 - -
Vifa4g04238 286 PANTHER - 66 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04238 Vifa-Chr4 1350418812 1350419756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04238 53 257 Glutathione S-transferase Gene Family AT5G41240 30.698 2.20e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04238 - - psat:127115199 374.015