Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04237 ATGCAAATACATTTCTCCATTACAGTTCTTGTTAGTTTCTTGCTCTTGCTTTCATTCTCAACCGCCGCAAACACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAGCTCTCTGCTTCCAAACACTCTCGAACAAAGTCAGTCCCACGGCGAAGCCCTTAGACCTGGCTCAGGCCGCCGTTAAAGCCAGTCTCGCCCGCACTCTCACCCTTTCCGTTTACCTCAAGAACACTCTAAAGTCACAGCTGACAGTTGGGTCTAAAGGTAACAACAGAAAGCGAGTTGCATTGAGTGACTGTGTTGCTCAGATTTCCGATTCTGTTCTTGAGTTGAACCGGACGTTGAACGAGTTACGGAAACTTCAGATGGGAACGTTCGAGTGGCAAATGAGTAACGCTCAGACATGGGCTAGTACTGCAATAACAAACGGTAACGCGTGTATCAACGGTTTGAATAGGAGTGACGCAGAAGAGAAGATGAAGGTGGAGGTGAAACGTAGGGTTACGGAAGTATCCATGTTTACAAGTAACGCTCTCTACTTTATCATTCGTCTCGGTGATAGCAGGAATCCAAAGCCTCACTTTAATTCCAATAACTGA 612 0.4657 MQIHFSITVLVSFLLLLSFSTAANTPQDLLRSSCAQARYPALCFQTLSNKVSPTAKPLDLAQAAVKASLARTLTLSVYLKNTLKSQLTVGSKGNNRKRVALSDCVAQISDSVLELNRTLNELRKLQMGTFEWQMSNAQTWASTAITNGNACINGLNRSDAEEKMKVEVKRRVTEVSMFTSNALYFIIRLGDSRNPKPHFNSNN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04237 203 Coils Coil 105 125 - -
Vifa4g04237 203 Pfam Plant invertase/pectin methylesterase inhibitor 29 183 IPR006501 GO:0004857
Vifa4g04237 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Vifa4g04237 203 SMART PMEI_2 25 185 IPR006501 GO:0004857
Vifa4g04237 203 NCBIfam pectinesterase inhibitor domain 4 187 IPR006501 GO:0004857
Vifa4g04237 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 186 IPR035513 -
Vifa4g04237 203 CDD PMEI-like_3 32 189 - -
Vifa4g04237 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 189 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04237 Vifa-Chr4 1350392219 1350392830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04237 29 192 Carbohydrate Esterase AT3G14310 30.120 5.08e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04237 - - mtr:25494163 277.33