Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04222 ATGGGAAGAGAACCAGCAAAGCCGCAACAACAAGGTCAAGAAACCGATTACACCGTCGATCAGCTCGTCGCATTCAATCGTTACAATCCCGATATTTTTCCAGATCTCGAAAACTCCGTCAATGAACAGACTTACAGCCTCGAATCAAATCTCTGCCTTCTTCGCCTCTACCAGTTTGAACCTGAGAAACTGAGTTCCCAGATTGTGACTCGCATGTTGGTTAAGGCACTCATGGCTATGCCGGGTCCAGACTTCAGTCTATGTCTCTTTTTGATTCCCGAACGTGTGCAAATGGAGGACCAGTTCAAGACATTGATTGTTCTGTCTCACTATTTGGAGACCGGAAGGTTTCGTCAGTTCTGGGACGAAGCAGCCAAAAACCGTCATATACTTGATACTGTGCCAGGATTTGAGCAGGCAATCCAAGGCTATGCAGTTCATGTCTTATCATTGACTTACCAAAAGGTTCCTAGAACTGTGCTTGCTGAGGCTATCAACATAGAAGGTTTAGCTTTGGACAAATTCCTTGAACACCAAGTAGCAAACTCTGGTTGGGTAATTGAGAAAAGCCAGGGTAGGGGTCAACTCATCGTCCTTCCCAGAAATGAATATAATGACCCAATTTTGAAGAAAAACACTGCTGAAAGTGTACCATTGGAGAATATTACTCGCATCTTCCCTATTCTTAGTTGA 693 0.4416 MGREPAKPQQQGQETDYTVDQLVAFNRYNPDIFPDLENSVNEQTYSLESNLCLLRLYQFEPEKLSSQIVTRMLVKALMAMPGPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRQFWDEAAKNRHILDTVPGFEQAIQGYAVHVLSLTYQKVPRTVLAEAINIEGLALDKFLEHQVANSGWVIEKSQGRGQLIVLPRNEYNDPILKKNTAESVPLENITRIFPILS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04222 230 ProSiteProfiles PCI domain profile. 45 204 IPR000717 -
Vifa4g04222 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 5 227 IPR009374 GO:0003743|GO:0005737|GO:0005852
Vifa4g04222 230 Gene3D - 126 229 IPR036388 -
Vifa4g04222 230 SUPERFAMILY "Winged helix" DNA-binding domain 135 227 IPR036390 -
Vifa4g04222 230 FunFam Eukaryotic translation initiation factor 3 subunit K 126 229 - -
Vifa4g04222 230 FunFam Eukaryotic translation initiation factor 3 subunit K 10 123 - -
Vifa4g04222 230 SUPERFAMILY ARM repeat 13 133 IPR016024 -
Vifa4g04222 230 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 10 230 IPR009374 GO:0003743|GO:0005737|GO:0005852
Vifa4g04222 230 Pfam CSN8/PSMD8/EIF3K family 64 191 IPR033464 -
Vifa4g04222 230 Gene3D ARM repeat; domain 1 11 123 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04222 1 230 Eukaryotic Initiation Factors Gene Family AT4G33250 72.414 3.61e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04222 K15028 - gmx:100306445 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04222 4 1343477153 1343479613 Vifa4g04222 4 1343477153 1343479613 ECH