Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04221 ATGGCTTCGTTGGAGAATTGTGAACGTTCTCACTCTCCTTCCCTCTCTGACGAAACGCATCCTCCTTCCAATTTATGTATGCAGAAATTTAGGCTTTATGAGACTCGATCGAACTTTTACATGATTGGAAGGGACAAGAGTAGGGCGTACTGGAGGGTACTAAAGATTGACCGCCTAGATCCTTCTGAGCTAAATGTGCGTGAAGATTCCACCACATATTCAGAAAGGGAGTGTTCTGATCTTTTGAGGCGAATACACGAGGGGAACAAGTCCACTGGCGGACTTAAATTTGTTACAACTTGTTATGGAATTGTTGGATTCATCAAACTTTTGGGGCCTTACTACATGCTACTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTATCTCAAAGACTGAGATGATTCCATTGCCGAATTCTTCTGTTCGGTCTACCATCACCGATTCTAAAAATGAAAACAGGTACAAGAAGCTTCTATGCACAGTTGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCATATTATGCGTAGTCTTCAAAGGAACATGTGCAATGCTGAGACAGGCCATGTCCTTTACGAGACGATGTTTGTTTGGAATGAATTCTTGACTCGAGGAATTAGGAATCACCTCCAGAATACTTTTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTTACGCTCATTGCGAGAAGATCTCGCCATTATGCTGGGACTAGGTATTTGAGGCGAGGTGTTAATGACAAGGGCAGAGTAGCAAATGACGTTGAGACAGAACAAATAGTCTTTGAGGATGTTCCAGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAATCGTGGCTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTTTAAATATTAAACCAGATATTATACTGTCAAAGAAGGACCAGAACTATCAAGCCACTAGACTTCACTTTGAAAATCTTGTCAAAAGATATGGAAATCCCATTATAATTTTGAATTTAATAAAGACCCATGAGAAGAAACCTCGTGAGGCCATCCTTCGTCAAGAGTTTGCTAATGCTATAGATTTCATCAATAAAGATTTGTCTGAGGAAGACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTGTTGCTGCTTCTAAGCAAAGTGGCAGCATATGCATTGGCATTAACAGGTTTTTTCTATTGCCAAGCGTCATCAACCTTGAGACCTGAAGACTGTCTAAAATGGCCACCTACAGATGAGGCTGTCAAGAGAAGTTTTTCACCTACCAGAAGAGCTGATGACGATGATGATGATGCTAATTATTTAGAGAGGAGACCAAGTGACGGGATCAATGTTTCCAAGGAAAATGGTTCTGCTAAATCACCCAGGTTGCAAAGGGGGGTGCTAAGGACCAACTGCATAGACTGCCTGGATCGCACAAATGTTGCACAATATGCGTATGGGTTGGCTGCTATTGGCCACCAGCTTCACTCTCTGGGAATTGTTGAGCACCCAAAAATTGATCTTGATGACCCCGTAGCCAATGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATACGGTGGTTCTGCTGCACACAACAAGATATTCTCCGCGAGGAGAGGTCAATGGAGAGCTGCAACGCAGTCTCAGGAGTTTTTTAGAACTCTTCAACGTTATTACAGCAATGCTTGGATGGATGCCGAGAAACAAGATGCAATCAATGTTTTCCTGGGGCATTTTCAGCCACAGCAGGGTAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCACTATGACACAGGGAGACTTGGTGATGATGATGCAAGGTCATTTTTCAAAAGATCTTTCTCAGATGGAAATTTTCTCCGTGATAGCTCTACACCTATGTCAGCTCCAAATTCTAAGACTGAAAAATCCCCAAATCCAGGTTTACCAGACCGATCAGGAGAAGGGAGCAAGGCTTTTTGTGAGTCATCACCTGAAATATCTACTGCTGAGCCTGAGTGTGACATTTCATTTTCAAGATACACTCCCTCAATGTCCGGGAGACAGCTTTTTGTGGACATGCAGAAAGAGCGATGTGCTGAGACTCGTCATATTTACTATTCTGAACATGTGGATTCCTTCACCTGCTCCAACTTTGTGGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATACGAGAGGTCATCTATTACCAGCTCCCCGGTTGCTGAACTATCATCAGAAAATGTTGTCAATGGAGTGGTAGTTGGAGAAACAGCTGCCTCCACTAGTGATTGGGCCAGCTCCAGCCTAAAGGTACCTCCAGTTATGGAGAGTGAAGCAAGTGAATCAGAGGCATCCTACCGTGATGCACAAACCAACAATCCAGATGAATTCCCTGATACTTTTGTTGAATGGGTGACTTATGGACAGACACTCTGCCACTGA 2541 0.4321 MASLENCERSHSPSLSDETHPPSNLCMQKFRLYETRSNFYMIGRDKSRAYWRVLKIDRLDPSELNVREDSTTYSERECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKLLGPYYMLLITKRRQIGAICGHTVYAISKTEMIPLPNSSVRSTITDSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCNAETGHVLYETMFVWNEFLTRGIRNHLQNTFWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNDKGRVANDVETEQIVFEDVPEGLPIQISSIIQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPREAILRQEFANAIDFINKDLSEEDRLRFLHWDLHKHFQSKATNVLLLLSKVAAYALALTGFFYCQASSTLRPEDCLKWPPTDEAVKRSFSPTRRADDDDDDANYLERRPSDGINVSKENGSAKSPRLQRGVLRTNCIDCLDRTNVAQYAYGLAAIGHQLHSLGIVEHPKIDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWRAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQQGKPALWELGSDQHYDTGRLGDDDARSFFKRSFSDGNFLRDSSTPMSAPNSKTEKSPNPGLPDRSGEGSKAFCESSPEISTAEPECDISFSRYTPSMSGRQLFVDMQKERCAETRHIYYSEHVDSFTCSNFVDLDWLSSSGNSCEEEPYERSSITSSPVAELSSENVVNGVVVGETAASTSDWASSSLKVPPVMESEASESEASYRDAQTNNPDEFPDTFVEWVTYGQTLCH 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04221 846 MobiDBLite consensus disorder prediction 449 486 - -
Vifa4g04221 846 MobiDBLite consensus disorder prediction 449 475 - -
Vifa4g04221 846 MobiDBLite consensus disorder prediction 1 22 - -
Vifa4g04221 846 ProSiteProfiles Sac phosphatase domain profile. 166 559 IPR002013 GO:0016791
Vifa4g04221 846 MobiDBLite consensus disorder prediction 795 831 - -
Vifa4g04221 846 Pfam SacI homology domain 102 399 IPR002013 GO:0016791
Vifa4g04221 846 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 18 837 IPR043573 GO:0043813|GO:0046856
Vifa4g04221 846 MobiDBLite consensus disorder prediction 654 672 - -
Vifa4g04221 846 MobiDBLite consensus disorder prediction 654 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04221 Vifa-Chr4 1343462116 1343470986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04221 27 846 Acyl Lipid Metabolism Gene Families AT3G43220 61.314 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04221 K22913 - gmx:100810079 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04221 4 1343462116 1343470986 Vifa2g03867 2 1128739751 1128748949 ECH
Vifa4g04221 4 1343462116 1343470986 Vifa4g04221 4 1343462116 1343470986 ECH