Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04191 ATGGCAACGTCTAATGTGACATGTCCTGCACCTATGAAGGCGGTGTCTAATGGCGCATTCCAACATGAAAATCCACTTGATTTCGCAGTTCCTCTTATCATCCTTCAGATATGTGTGGTTGTTACATTCACTAGGTTTATTGCTTTCCTTTGCAAACCCCTCAAGCAACCTCGAGTCATCGCAGAAATCATTGGAGGAATATTACTCGGCCCGTCTGCCATTGGACGAAGCCAGAAATTTCTAGACACAGTTTTTCCAAAGAGAAGCTTAACAGTCCTAGATACACTAGCGAACATTGGTCTTTTGTTCTTCTTATTCCTAGTTGGTCTTGAACTCGACATGCGTTCGATCAAGAAAACAGGTCACAAAGCCTTAGGAATTGCGCTATGTGGAATCACGGTTCCGTTCGTGCTTGGCATTGGAACTTCCTTTGTTCTTAGAGCTACAATCTCCAAAGGTGCAGAGGCTGTCCCATTTCTTGTCTTCATGGGCGTTGCTCTATCGATTACTGCATTTCCCGTCCTCGCTCGAATCCTAGCTGAGCTCAAACTCCTGACCACTGATGTCGGTCGTATAGCAATGTCAGCAGCTGCTGTCAATGATGTTGCAGCTTGGATACTTCTTGCTCTTGCCATAGCTTTATCAGGAGACGACACGTCCCCGTTGATTTCTCTTTGGGTTATGCTCACTGGTGCTGCTTTTATTCTCTTTGCTGTTTTCGCTATTAGACCGTTGCTTGCATACATGGCGAAGCGTTCCCCCGAGGGGGAGCCTGTGAAGGAGCTCTACATTTGCATCACACTGACATTGGTTTTGGCTTGTAGTTTTGTTACCGATACTATTGGAATTCATGCATTGTTTGGTGCTTTTGTTGTTGGTATTATTATGCCTAAAGACGGTCCTTTTGCTGGTGTTTTGATCGAGAAAATCGAAGATCTTGTGTCTGGAATTTTCTTGCCACTTTATTTTGCTTCTAGTGGTTTGAAGACAAATGTTGCAACTATTAAAGGAGGGGTGTCTTGGGCACTATTAGCACTTGTTATATTCAATGCTTGCTTTGGGAAAATCATTGGTACAGTTGTAGTATCATTACTATTCAAGGTGCCTTTTAGAGAATCACTTGCACTTGGATTTCTCATGAACACCAAAGGATTGGTAGAGCTCATTGTTCTCAATATCGGAAAGGATCGTAAGGTACTAAATGACCAAGCGTTTGCAATTTGTGTTCTTATGGCATTATTCACAACCTTCATCACCACGCCAATTGTGATGGCAGTGTATAAACCAGCTAGAAGAGGTGCACCTTACAAGCACAAAACAATTCAACGCAAAGATCGCGATTCAGAGCTCAGAGTGTTGGCGTGTTTCCACAGTACCCGCAACATCCCTACATTAATCAACCTGGTAGAATCCTCCAGAGGAACGCGAAAGCGCGGAAGACTTTGTATCTACGCAATGCACTTGATGGAACTCTCGGAAAGATCTTCAGCTATTTCCATGGTTCACAAGGCGCGTAACGATGGCATGCCATTTTGGAATAGAAAAGAGAATGATAAAGACCAAATGGTTATCGCTTTCCAAACCTACGGAAAGTTGAGCAGTGTCAACGTCCGTCCCATGACAGCAATCTCAGCTCTCGCCAACATTCATGAAGATATTTGTACTAGTGCTCATCAAAAGCGCGCCGCGATAATAATCCTTCCGTTTCATAAACATCAACGTGTCGACGGAACAATGGAATCATTAGGACATTCATTCCATGTAATCAATCAGCTCGTGTTGAGTCACGCACCTTGTTCTGTTGGAATTTTGGTTGATCGCGGTCTTGGAGGAACAAGCCAGGTTCAAGCTAGTGATGTTTCTTTCAATGTCGTTGTAGTATTCTTTGGAGGACCAGACGATAACGAAGCGCTTGCTTACGGTATGAGAATAGCAGAACATCCTGGTATTGTGCTGACTGTTGTTAAATTTGTGTCTCCACCTGGAACAACATTATCATTTGGTGCTAAGTTAGTCGGTGTTGCATCGGATAAGAGCAAAACAGTAGTGATCGATGATAGCGAAGGTAGTAGTAATCATGGTGGTAATAAAAACCAAGATGAACAATATTGGAGTGAGTTTTTCAATGCAAGAAGCAGCAATGAAGAATCAATTAAGTATGAAGAAAAGCTGGTTGAAAGTAAAAGTGATATTGAGACAGCATTGAAGGAATTAAGTAGAAGCAATTTGATATTGGTAGGTAGAATGCCACCAGTTGCACCTTTGGTTAGTACAAGTGATTGTCCTGAGCTTGGTCCTGTTGGAAGCTATTTGAGTTCTTCTAGTTTCTCCAATTCTGCATCAGTATTGGTTATTCAACAATATAATCCTTCAACTGATATTCATCCTATGGTTATGGAGGAATTTGATTGTCCAGAAGTGCCAGACACACCTATTAATCTGTGA 2445 0.4241 MATSNVTCPAPMKAVSNGAFQHENPLDFAVPLIILQICVVVTFTRFIAFLCKPLKQPRVIAEIIGGILLGPSAIGRSQKFLDTVFPKRSLTVLDTLANIGLLFFLFLVGLELDMRSIKKTGHKALGIALCGITVPFVLGIGTSFVLRATISKGAEAVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGDDTSPLISLWVMLTGAAFILFAVFAIRPLLAYMAKRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGIFLPLYFASSGLKTNVATIKGGVSWALLALVIFNACFGKIIGTVVVSLLFKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDRDSELRVLACFHSTRNIPTLINLVESSRGTRKRGRLCIYAMHLMELSERSSAISMVHKARNDGMPFWNRKENDKDQMVIAFQTYGKLSSVNVRPMTAISALANIHEDICTSAHQKRAAIIILPFHKHQRVDGTMESLGHSFHVINQLVLSHAPCSVGILVDRGLGGTSQVQASDVSFNVVVVFFGGPDDNEALAYGMRIAEHPGIVLTVVKFVSPPGTTLSFGAKLVGVASDKSKTVVIDDSEGSSNHGGNKNQDEQYWSEFFNARSSNEESIKYEEKLVESKSDIETALKELSRSNLILVGRMPPVAPLVSTSDCPELGPVGSYLSSSSFSNSASVLVIQQYNPSTDIHPMVMEEFDCPEVPDTPINL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04191 814 FunFam Cation/H(+) antiporter 15 32 434 - -
Vifa4g04191 814 PANTHER CATION/H + ANTIPORTER 7 789 - -
Vifa4g04191 814 Gene3D - 32 434 IPR038770 -
Vifa4g04191 814 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04191 Vifa-Chr4 1335164721 1335167470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04191 1 803 Antiporter Super Family AT3G17630 71.252 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04191 K26731 - gmx:100780382 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04191 4 1335164721 1335167470 Vifa4g04191 4 1335164721 1335167470 ECH