Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04185 ATGTGGCAAAGAAACATGAGTTTTGTTGGCATGAAGGTGTTATGTGTGTTTGTGTTGATAGGTTTTGTGATTGTGGAAGGTTTAGAGAATGGTAATGTGACAGAGATGGAGTTTGTGAGAGGAAGAGGCTTCTACAATAGACCTTTGATGGTTGGTCTTACTCTTATCAATGGAGCTGCTGCTAAAGGAGCTGTTTGTCTAGACGGATCTTTACCGGCTTATCACTTCCACCGTGGATACGGTTCAGGATCAAATAGTTGGCTGATACATCTAGAGGGAGGAGGCTGGTGTGGAACTATCAGAAATTGTATTTACAGTAAGAAAACGCGTCACGGTTCATCCTATTTTATGGAAAAACAAATACCTTTCATTGGAATATTGAGCAACAAAGCCCAGGAAAATCCAGATTTTTACAACTGGAATAGAGTTAAAATTCGTTATTGCGATGGCGCATCGTTTAGTGGGGACAGTCAAAATGAGGCAGCAGGGTTGTATTTCAGAGGGCAGCGCATTTGGCAAGCTGCAATGGAAGATTTAATGTCAAAAGGAATGCGATATGCCAAACAGGCTCTTCTATCCGGGTGTTCTGCAGGAGGTTTATCAGCTATACTACATTGCGATGATTTCCGAGAATTGTTTCCAAGAACTACTCGAGTAAAGTGCTTTAGCGATGCTGGATTATTCCTTGACTCCGTCGATGTAGCTGGCCGTCGTAGTTTAAGGAATTTGTTTGGAAGTGTAGTCACCTTACACGGTGCGCATAAGAGCCTTCCAACGAGCTGTACCAGTCGCCGCAATCCAATTTTGTGCTTTTTTCCTCAGCGTTTAATCGCAAGTGTTAGGACCCCGCTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCTAGTCTAGCTCCACCGTCTGCTGACTATCGTTGGAATTGGTTTGATTGCAGAAAAAATTACGCACGCTGCAGTTCACCGCAGATACAATATCTACAAGGTTTTCGTAACCAGATGCTTAGAGTTACAAGACGGTTCTCATGGTCGCGCCAAAATGGATTATTCATTAATTCGTGTTTCGCTCACTGCCAATCGGAAAGACAGGATACATGGTTTGCTCGCGGATCTCCTCATATTGGAAATAAAGGGATCGCGGATTCTGTCGGGAACTGGTTTTTCGACCGAGTCAATGTTCAAGCTATAGGGTGTGCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTAA 1245 0.4313 MWQRNMSFVGMKVLCVFVLIGFVIVEGLENGNVTEMEFVRGRGFYNRPLMVGLTLINGAAAKGAVCLDGSLPAYHFHRGYGSGSNSWLIHLEGGGWCGTIRNCIYSKKTRHGSSYFMEKQIPFIGILSNKAQENPDFYNWNRVKIRYCDGASFSGDSQNEAAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLSAILHCDDFRELFPRTTRVKCFSDAGLFLDSVDVAGRRSLRNLFGSVVTLHGAHKSLPTSCTSRRNPILCFFPQRLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWFDCRKNYARCSSPQIQYLQGFRNQMLRVTRRFSWSRQNGLFINSCFAHCQSERQDTWFARGSPHIGNKGIADSVGNWFFDRVNVQAIGCAYPCDKTCHNLVFN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04185 414 PANTHER NOTUM-RELATED 23 410 IPR004963 GO:0016787
Vifa4g04185 414 Pfam Pectinacetylesterase 48 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04185 Vifa-Chr4 1332751079 1332753711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04185 50 413 Carbohydrate Esterase AT1G57590 69.231 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04185 K19882 - gmx:100791571 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04185 4 1332751079 1332753711 Vifa4g04185 4 1332751079 1332753711 ECH