Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g04173 | ATGTGCAGAGACAGTAATACTCCCTCTCTCCACACTTGCTACCGTCCCTCCTCTCTTCAATCTAAACACACAAACAATTTCCACACAATTAACAACACACCTTCAATACACGAACCTAATCTGTTCAAACCCCCACCTTCCTCCTCTCGCCACTGTCCATCACCCTCATCATCAGACAAGCCCCTCCGATTGCCCCTTCAGGATGTCTACAAGATTGGAGGAATTGGAACTGTGCCTATGGGACGTGTTGAGACTGGTGTCATCACACCTGGAATGGTGGTCACTTTTGCTCCATCTGGACTATCAACTGAAGTCAAGTCTGTTGAGATGCACCATGAAGCTCTCACGGAGGCCCTTCCCGGTGACAATGTTGGGTTTAATGTTAAGAATGTTGCTGTTAAGGATCTCAAGCGTGGTTTTGTTGCCTCTAACTCCAAGGATGACCCAGCCAAGGAGGCTGCTAACTTTACCTCTCAAGTGATCATCATGAATCACCCTGGTCAGATTGGAAATGGCTATGCCCCTGTTCTTGACTGCCATACCTCATACAACTGCCACCTTAGACCACCAGACCTCTTCTGCAGATCCACGCCGCCATGA | 600 | 0.485 | MCRDSNTPSLHTCYRPSSLQSKHTNNFHTINNTPSIHEPNLFKPPPSSSRHCPSPSSSDKPLRLPLQDVYKIGGIGTVPMGRVETGVITPGMVVTFAPSGLSTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSYNCHLRPPDLFCRSTPP | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g04173 | 199 | CDD | EF1_alpha_II | 58 | 148 | - | - | |
Vifa4g04173 | 199 | Pfam | Elongation factor Tu domain 2 | 76 | 141 | IPR004161 | GO:0005525 | |
Vifa4g04173 | 199 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Vifa4g04173 | 199 | FunFam | Elongation factor 1-alpha | 57 | 144 | - | - | |
Vifa4g04173 | 199 | Gene3D | Translation factors | 151 | 186 | - | - | |
Vifa4g04173 | 199 | Gene3D | Translation factors | 57 | 144 | - | - | |
Vifa4g04173 | 199 | Pfam | Elongation factor Tu C-terminal domain | 149 | 182 | IPR004160 | - | |
Vifa4g04173 | 199 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Vifa4g04173 | 199 | SUPERFAMILY | Translation proteins | 59 | 183 | IPR009000 | - | |
Vifa4g04173 | 199 | PANTHER | ELONGATION FACTOR 1 ALPHA | 52 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g04173 | Vifa-Chr4 | 1328048930 | 1328050615 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g04173 | 58 | 183 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 92.063 | 1.60e-80 | 245 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g04173 | K03231 | - | gmx:110008577 | 246.899 |