Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04067 ATGGCTATGCAGTTGATAGCATTGTTGTCTGTACTGATACTCAACCTTACTTCAGTATTTGCAGCCACGGTGAATGAAGCCTATGGTGGTGATATTAATACTGGATGTCCATTAGGGTCTGACATATACCAATATTCTTGTCCTCAAGCAGAGGCCATAATCTTTTCTTGGGTTGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCATTGCTAAGGCTTCATTTCCATGATTGCTTTGTCAATGGTTGTGATGCTTCAGTGTTGCTAGATGACACACAAGACTTTGTTGGTGAGAAAACTGCTGCTCCAAACTTGAATTCACTCAGAGGATTTGAAGTGATCAATGAAATAAAATCTGAACTAGAACTAGTTTGTCCACAAACTGTTTCTTGTGCTGACATACTAGCAACTGCCGCTAGAGATTCAGTTGTTCTGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACGGCTAGCAAGGTAGGAGCAAACAATAACATTCCAGGCCCAAACTCAACCGTTGATGTACTTGTGTCCAAGTTTGAAAACGTCGGCCTTACACTTCAAGACATGGTTGCACTCTCAGGTGCACACACAATCGGAAAAGCCCGGTGCTCAACATTTAGTTCCCGCTTACAAAGCAACAGCATCTCTGATGGTCCGTATGTTGATGTGGAATTTGTCGCATCGTTGCAACAGTTGTGTTCAGGACAAGGTAATAGCAATCGAATTGCACATCTGGACCTGACCACACCAGCTACATTTGATAACCAATATTATGTTAATCTTCTCTCTGGGGAAGGACTGCTTCCATCAGATCAGACTCTGGTGAGTGGAAATGATCAGACACGGCAGATTGTTGAAACCTACGTAGAGAACCCATATGCTTTCTTTGAAGACTTCAAGATTTCAATGATAAGAATGGGAAGCTTGGGATCGGATGCGCAGAGTAACGGGCAGATTCGCAGGGACTGCCGAACTATAAACTAA 1011 0.4322 MAMQLIALLSVLILNLTSVFAATVNEAYGGDINTGCPLGSDIYQYSCPQAEAIIFSWVEQAVSSDPRMAASLLRLHFHDCFVNGCDASVLLDDTQDFVGEKTAAPNLNSLRGFEVINEIKSELELVCPQTVSCADILATAARDSVVLSGGPTWEVQMGRKDSITASKVGANNNIPGPNSTVDVLVSKFENVGLTLQDMVALSGAHTIGKARCSTFSSRLQSNSISDGPYVDVEFVASLQQLCSGQGNSNRIAHLDLTTPATFDNQYYVNLLSGEGLLPSDQTLVSGNDQTRQIVETYVENPYAFFEDFKISMIRMGSLGSDAQSNGQIRRDCRTIN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04067 336 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601
Vifa4g04067 336 PANTHER PEROXIDASE 72-RELATED 38 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 FunFam Peroxidase 41 191 - -
Vifa4g04067 336 Gene3D - 43 336 - -
Vifa4g04067 336 Pfam Peroxidase 58 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 SUPERFAMILY Heme-dependent peroxidases 38 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 Gene3D Peroxidase, domain 2 175 316 - -
Vifa4g04067 336 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Vifa4g04067 336 FunFam Peroxidase 175 315 - -
Vifa4g04067 336 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g04067 336 CDD secretory_peroxidase 38 333 IPR033905 GO:0004601|GO:0042744
Vifa4g04067 336 ProSiteProfiles Plant heme peroxidase family profile. 37 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04067 Vifa-Chr4 1298464293 1298465558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g04067 42 336 Peroxidase AT4G16270 65.552 3.93e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04067 K00430 - gmx:100787637 545.428