Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04041 ATGGCTGAGAACAAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAAGTTGTAGGGAAGCTTGAAAGAAACTGTGAGATTGGAACTACTAAAAAGGGTTTCTCCATTTTCACCAACATGATCACTGACCCTTTATCTAGGATTAGGTTCTATCCCATTCGTATTATGTTGGTTGCTGAGCTGGTTGAATGCAGGGAGCTTGTTGGAGTTGTTAGAGGATGCATTAAAAGTGTGCAAACTTCTTCTGGATCACTCTTCAAGATGGGTTGCATGCTAGGCCTTAGAGTCTCTCCTGCATCTAGGAGAAAGGGGGTTGGACTAAAACTTGTAACCTCAATTGAAGAATGGATGCTAAGAAATGGTGCTGATTATGCATTCCTAGCCACAGAAAAGAACAACACTGCCTCAAAAAACCTATTCACCAACAAATGCAACTATGTCAATCTCAGTTCACTTATCATATTTCTCCACCCAATTACTTTCCCTATAACAAACCACATTTCTTCCAAGAACATCAAAATAGAAAAAATAAATATAGACCAAGCAATTTCCATATACACAAGAATCTTGAAAACCAAAGATTTGTATCCATTAGATATGGACATTATTCTCAAAGAGAAACTCAGTTTAGGAACTTGGGTTAGTTATTACAAAGATCAAGACTTCAAACTCCACAATAGCACCGAGGACATTCTTACCGATAAAATCACAACAAACTCATCATGGATCATTTTTAGTTTATGGAACACTTGTGAAACTGATGATAATAATAATAGTAATAATAAGGTTCGAGATGTTAAAACAAAACTATCTCAACCACTTAGGTTTCTTCATGCGACATTAAATCATGCAAAGGACAAAATCTGTCCGTGTTTGAGAATGTTGAGGAATGAGTCAATAATGTGTAACAGTTTCGGGTTTCTTTTTCTTTATGGACTTCATGGAGAAGGAGATAATCTAGAAGGGTTAATGGAATCAGTATGGAGGTTTACATCAAGCATAGGAGAAAAGTTAAAGGAATGTAGAGTTGTGATAACTGAATTAGGGTTTGATGATCCACTTGTAAACCATGTTCCTCAAATTGATTCAATGACTTGTGTTGATGATATGTGGTACGCAAAAAGACTTGGAAATCACGGTGATGATGAAGTGGTGGAAGTGATGAAGAAACAACTGGGGAATGTGTTTGTTGATCCTAGAGATTTTTAG 1215 0.3638 MAENKVVIREFDEDRDVKVVGKLERNCEIGTTKKGFSIFTNMITDPLSRIRFYPIRIMLVAELVECRELVGVVRGCIKSVQTSSGSLFKMGCMLGLRVSPASRRKGVGLKLVTSIEEWMLRNGADYAFLATEKNNTASKNLFTNKCNYVNLSSLIIFLHPITFPITNHISSKNIKIEKINIDQAISIYTRILKTKDLYPLDMDIILKEKLSLGTWVSYYKDQDFKLHNSTEDILTDKITTNSSWIIFSLWNTCETDDNNNSNNKVRDVKTKLSQPLRFLHATLNHAKDKICPCLRMLRNESIMCNSFGFLFLYGLHGEGDNLEGLMESVWRFTSSIGEKLKECRVVITELGFDDPLVNHVPQIDSMTCVDDMWYAKRLGNHGDDEVVEVMKKQLGNVFVDPRDF 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04041 404 CDD NAT_SF 58 129 - -
Vifa4g04041 404 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 211 IPR000182 GO:0016747
Vifa4g04041 404 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 404 - -
Vifa4g04041 404 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 143 IPR016181 -
Vifa4g04041 404 Pfam Acetyltransferase (GNAT) family 67 148 IPR000182 GO:0016747
Vifa4g04041 404 Gene3D - 6 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04041 Vifa-Chr4 1290568085 1290569757 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa4g04041 Acetyltransf_1 7.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04041 - - psat:127073193 721.465