Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03991 ATGGGACAAGAATCAGATTCCAAAGCCAGGTTAGTGTTAGAGATTTGTTCCATTTCCACACGTTCTGCAACATGTGTTCATACCATTCTTTCAAACCCAACCAAAACAACTTTCATTGACTGGTATTGCATTCTTGGAGTAGAAGAAAATGCAGGGGTAAATACAATTCGCAAGAGATACCATAAACTTGCCTTGCAACTTCACCCAGATAAGAATAAACACCCAAAGGCTGAGATTGCCTTCAAGCTCGTTTCTGAGGCAAATTCATGTCTAACTAATGAAGCAAAACGAGAAGCTTTCGAATTCGAGAGGTACAAGCATTTCTGTATCGAGTGCAAAAGAATTCCATATACATCATCCAATGTTAGTGCGGATTCCAGTAGTTCAGGTTTCAAGGCATGGAGTATTATGACAAGGTCAAGATCTTTAAAGTTTTGGAGAAATATTAGGGACATTGGAGAGAGATTTAAGGAAGAGGCTAATGTGATTGATAATTGTTTGAGAGTAAATTCAATGTCACGGAATGAATCTTCTTCGGTCTACAATCGAGCTAGTTATCTAAATAGGAGCGAGTCGGGGCATAGATTTGAGAAAGAAACTCGTGTTTTCGATCCATCGGATAACTTGTACCAAAGATATCCTCATGTTAACAAGAGTTCTTCCATGTTTTGGTACTCGCGGAGAAATAGTATGGTCGAAAATGAAAAGAGAGGAGCGCGATATAGTTCTCCTGTTTTTGAGGTCAAAAGAAGGACTATGTTTTCAAACCAATTTGCTTTTGCACCATCAAGATATTAA 798 0.3847 MGQESDSKARLVLEICSISTRSATCVHTILSNPTKTTFIDWYCILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEANSCLTNEAKREAFEFERYKHFCIECKRIPYTSSNVSADSSSSGFKAWSIMTRSRSLKFWRNIRDIGERFKEEANVIDNCLRVNSMSRNESSSVYNRASYLNRSESGHRFEKETRVFDPSDNLYQRYPHVNKSSSMFWYSRRNSMVENEKRGARYSSPVFEVKRRTMFSNQFAFAPSRY 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03991 265 ProSiteProfiles dnaJ domain profile. 40 104 IPR001623 -
Vifa4g03991 265 PANTHER BNAC03G44070D PROTEIN 8 221 - -
Vifa4g03991 265 ProSitePatterns Nt-dnaJ domain signature. 81 100 IPR018253 -
Vifa4g03991 265 Gene3D DnaJ domain 39 159 IPR036869 -
Vifa4g03991 265 CDD DnaJ 40 93 IPR001623 -
Vifa4g03991 265 PRINTS DnaJ domain signature 42 60 IPR001623 -
Vifa4g03991 265 PRINTS DnaJ domain signature 60 75 IPR001623 -
Vifa4g03991 265 PRINTS DnaJ domain signature 76 96 IPR001623 -
Vifa4g03991 265 SMART dnaj_3 39 96 IPR001623 -
Vifa4g03991 265 Pfam DnaJ domain 40 100 IPR001623 -
Vifa4g03991 265 SUPERFAMILY Chaperone J-domain 28 103 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03991 Vifa-Chr4 1275607636 1275608623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03991 40 101 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 2.29e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03991 - - gmx:100801809 371.318