Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03966 ATGGGCGGTCAGATGCATCAGAGCAATGCTGCCGCGGCTGCTCTGTATGACCACGCCGGCGCTGTACCCTTGCACGGTGCAGCGGCAGGGACTGCAACCGATGCCGGCGATGCTGTTATGGCACGCTGGTTGCAGTCTGCCGGCTTACAGCATCTGGCCTCTCCGTTGGCTTCAAATGCGATTGATCAACGACTTCTCCCCAATCTTCTTATGCAGGGTTATGGAGCACAGTCTGCGGAAGAAAAACAGAGGCTTTTAAAGTTGATGAGAGGTCTCAATTTTAATGGGGAATCTGGTTCAGAACCATATACACCTACTTCCCAAACTTTAGGTGGAGTGGCTGCATCAGATGGGTTTTATTCTCCTGACTTTAGGGGGGATTTTGGAGCTGGTCTTATGGATCTTCATGCTATGGATGATACAGAGCTTTTGTCTGAGCATGTTATCTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGTGCCAGAGAATTTGATGACGACTTCAACTCAGTCAGCAGCAAGCAGGAAGGAGGAGAAGCAATTGCTGACGCGTCACATTTTTTACCCGTGCATGAAAAAGACAGTAATACAAGAGAAAATAATGTTGCTAAGATAAAAGTGGTGGTACGCAAAAGACCTTTAAATAAAAAGGAGCTCGCTAAGAAGGAGGATGATGTCGTAACGGTCTGCGACAATGCATATTTGACTGTTCATGAGCCTAAAGTGAAGGTTGATTTGACAGCTTATGTCGAGAAGCACGAATTCTGTTTTGATGCTGTTATTGATGAGAATGTTACCAATGATGAAGTATATCGAGTTACAGTAGAACCTATTATTCCTACAATTTTCGAGAGGACAAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATTCACAATGCAACCATTACCACTCAGAGCTGCAAATGACCTTGTTAGACAGTTGCACCGACCAGTTTACCGGAACCAGAAATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTGTATGATCTTCTTGGTGACAGGAAGAAACTCTTAATGAGAGAGGATGGACGGCAGCAAGTTTGTATTGTAGGACTACAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGATTTCATCGAAAAAGGGAATGCAGCAAGGAGTACAGGATCCACTGGTGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAATGAAGTAAAAGAGAGCAGGAGAAAGAATGATGAAAATGAGACAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACTGACAATGACCGTCAGACAAGGATTGAAGGAGCAGAAATTAACAAAAGTCTTTTAGCTTTGAAAGAGTGCATTCGAGCTTTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGTAAACTTACGGAAGTACTCCGTGACTCTTTCGTTGGCAATTCAAAGACAGTCATGATCTCTTGTATATCTCCAAATGCGGGATCTTGTGAACACACACTCAATACGTTGAGATATGCCGATCGAGTCAAGAGTCTGTCCAAAAGTGGAAATTCTAGAAAAGACCAGGCCCCAAATCCAGTATCACAGTCAAATAAAGAGGTTTCATCCACATCATCCCTTCCAGACAGTGCTTGTGCCGAGGATTTTTATGATCAACGTCAACAGATGAGAACAACGGATATGGGCAGGAAAGTTATCGAGAAGGAACCCTCTCTGTACAGCTCTGCTGCTGATGTTGACAAGCAACCATCGAGTTTTTCTTCCAGTTCTTTATTCAACGGGCGAGAGGAGAAAGGTTTGCCCTATGTCTCAATGGACAGGAACAGGCTTGAAGTGAAGAACGTGACTGTTCAAAAGATGAACCCTTATTCCCAGAATGATGCGGATGAGAAAGTGCTAAAGGTGTCTCCCCCGCGCAGAAAAGGGACAAAGGAGGAGAAACCTGAAAGGTCCTTGAACTGGCCAAAAAGGGATGTCAATGGTTCTGATCATTTCATTACAAGCTCCAAGCAGCAAAGCACGGGGAGTTTTAACACAGTTACCGCCGGATCCAGGCAGCCTGAAACAGAATCCTCTCCTGATGTGAATAATAGTGCTGTTCTTGAGGAGGAAGAAGCTCTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTCCGTGATGAAATGAAACTATTAGCAGAAGTGGACCAGCCAGGAAGTATTATTGACAACTATGTAACCCAGTTGAGTTTTGTGCTTTCGCGCAAAGCAGCTAGTCTCGTAAGTCTCCAGGCCCGCCTTGCAAGGTTTCAACATCGACTAAAAGAACAGGAGATACTAAGCCGGAAAAGAGTACCCCGTTAA 2439 0.4432 MGGQMHQSNAAAAALYDHAGAVPLHGAAAGTATDAGDAVMARWLQSAGLQHLASPLASNAIDQRLLPNLLMQGYGAQSAEEKQRLLKLMRGLNFNGESGSEPYTPTSQTLGGVAASDGFYSPDFRGDFGAGLMDLHAMDDTELLSEHVISEPFEPSPFMPGGAREFDDDFNSVSSKQEGGEAIADASHFLPVHEKDSNTRENNVAKIKVVVRKRPLNKKELAKKEDDVVTVCDNAYLTVHEPKVKVDLTAYVEKHEFCFDAVIDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTFTMQPLPLRAANDLVRQLHRPVYRNQKFKLWLSYFEIYGGKLYDLLGDRKKLLMREDGRQQVCIVGLQEFEVSDVQIVKDFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEVKESRRKNDENETKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNSRKDQAPNPVSQSNKEVSSTSSLPDSACAEDFYDQRQQMRTTDMGRKVIEKEPSLYSSAADVDKQPSSFSSSSLFNGREEKGLPYVSMDRNRLEVKNVTVQKMNPYSQNDADEKVLKVSPPRRKGTKEEKPERSLNWPKRDVNGSDHFITSSKQQSTGSFNTVTAGSRQPETESSPDVNNSAVLEEEEALIAAHRKEIEDTMEIVRDEMKLLAEVDQPGSIIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03966 812 MobiDBLite consensus disorder prediction 690 724 - -
Vifa4g03966 812 MobiDBLite consensus disorder prediction 540 571 - -
Vifa4g03966 812 Coils Coil 785 805 - -
Vifa4g03966 812 MobiDBLite consensus disorder prediction 605 622 - -
Vifa4g03966 812 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 PRINTS Kinesin heavy chain signature 397 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 ProSiteProfiles Kinesin motor domain profile. 206 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 PANTHER KINESIN-RELATED PROTEIN 6 33 810 IPR027640 GO:0003777|GO:0007018
Vifa4g03966 812 MobiDBLite consensus disorder prediction 645 724 - -
Vifa4g03966 812 CDD KISc_KIF2_like 206 538 - -
Vifa4g03966 812 SMART kinesin_4 204 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 FunFam Kinesin-like protein 186 543 - -
Vifa4g03966 812 Coils Coil 729 760 - -
Vifa4g03966 812 MobiDBLite consensus disorder prediction 660 685 - -
Vifa4g03966 812 MobiDBLite consensus disorder prediction 540 572 - -
Vifa4g03966 812 Pfam Kinesin motor domain 212 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa4g03966 812 MobiDBLite consensus disorder prediction 601 622 - -
Vifa4g03966 812 Gene3D Kinesin motor domain 183 543 IPR036961 -
Vifa4g03966 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 540 IPR027417 -
Vifa4g03966 812 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03966 Vifa-Chr4 1269226019 1269232244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03966 198 540 Calmodulin-binding Proteins AT5G65930 34.561 4.99e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03966 K10393 - gmx:100778915 1341.64