Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03958 ATGGAGGGTTTATTAGGGCAATCTTGGAAGAACAGAGACTTCACTCTCTCATCGGTTTCCGAACTCTCTTCCGATGCTTCTCACGCTTCACCGGGAATCGCTCGCTTCACCTCCGATGGTCTACAGATTCATCAACAATCTCAAGAGATTTCTCTCAATTTTGATCTCCGAACTTCTCAGATATTCAAATTGGGACCTGTTCAATCCGTTTGCATTATGGAAGGCTCTGATGTTGGTAAAGCGGAGTCGTATTCTACTGGAGTCACTATCCAGTTTAAAAACGAGGAGGAGTGTGAGGCCTTTCATTCTGTCGTCCAACAATGGATAAAGAAAGCTAATGTTCAAGCTGGGAGCTTACCAAATGGAACTTTAACAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGCGGACAGGAACTTATTATGCTGCGGTTATTGAGAACCGGGCTGATTTTACCGGCCGTGTAGTAGTTGATGTAGGTGCTGGTAGTGGTATATTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCCCGTAAACTTATAGCAGGAAACCCAAAACTGGCTCAACGAATTACAGTGATTAAAGGTAAAGTTGAGGATGTTGAGTTGCCAGAGAAAGCAGATATTCTGATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAACAAGGCCCTGTTCTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACACCCTTACACGGGACTGCATTTCAAGGATATTTTTCTCAGCCCGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCCCCGATGTTCCATGTATTAGACTTCACCAAAATGAAGGAAGAAGATTTGTATGAAATTGACATTCCTCTGAGATTCATTGCCTCTGTGGGCACCAGAGTGCATGGTTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCACTGGTACCAGTTACGCTGTGTGCTCTCGCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACTGGCAGGCTTCATTTGGTTGCCCACAATGCACAGAGTTATACAATACATTTAACTTTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTATACAAACATCTTCTTGCAAGCTTGATCTGAAAGAACCCTACTATAGAATGTCCCAAGCGCAAGCTTATCCTTTAGCCCAAGATCAGCAATCTCAACCTCTTGTACAGACACAGGATATCAATATCCAATCACATGAATTGGAAGAACCAGAAATAATGCAACAGCTTTCGCCTAATTCATGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1608 0.4248 MEGLLGQSWKNRDFTLSSVSELSSDASHASPGIARFTSDGLQIHQQSQEISLNFDLRTSQIFKLGPVQSVCIMEGSDVGKAESYSTGVTIQFKNEEECEAFHSVVQQWIKKANVQAGSLPNGTLTTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFTKMKEEDLYEIDIPLRFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLVAHNAQSYTIHLTLSAKMWGPGAEQGGIIQTSSCKLDLKEPYYRMSQAQAYPLAQDQQSQPLVQTQDINIQSHELEEPEIMQQLSPNSCAQIDSLMQKI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03958 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Vifa4g03958 535 FunFam Probable histone-arginine methyltransferase CARM1 285 493 - -
Vifa4g03958 535 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Vifa4g03958 535 Gene3D - 285 493 - -
Vifa4g03958 535 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Vifa4g03958 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
Vifa4g03958 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Vifa4g03958 535 CDD AdoMet_MTases 182 282 - -
Vifa4g03958 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 80 472 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03958 Vifa-Chr4 1267332091 1267338042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03958 143 451 C2H2 Transcription Factor Family AT3G12270 32.733 4.96e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03958 K05931 - gmx:100780736 939.873