Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03882 ATGTCTCCATTTAACCAAAAAATTGTCGTGATATGCATGTTGATGGTGTTAGCGGTGCAGTACGTTCACGGTGTTGATGTGAATGTTGTTAACTCACTTGGAAATCTTTTTAGAGTTCATGTCAATATTGTTAACTCTTTAGAAGGCAATTTAGACTTGACTCTTCATTGTAAATCTAAAGATGATGATCTCGGAGTTCATCTTTTACATCATGGTGAAGGCTTTAGTTTCAGCTTCCGTCCTGCATATATTGTTGCTACAACCTTGTTCTTTTGCTCCTTTGAATGGAGTGGTCAATTACATCGGTTTGATATATATGTAGATGGTGATGTTGCGACATCTGATTGTGATTATTGCAATTGGAATGTATTCAAATCAGGACCATGTAGAACTCCAGAACCAAAGTCGCCTACACGTACACCTATTTGCCTTCCGTGGAATAAGTCACAAAGAGTGTAG 459 0.3791 MSPFNQKIVVICMLMVLAVQYVHGVDVNVVNSLGNLFRVHVNIVNSLEGNLDLTLHCKSKDDDLGVHLLHHGEGFSFSFRPAYIVATTLFFCSFEWSGQLHRFDIYVDGDVATSDCDYCNWNVFKSGPCRTPEPKSPTRTPICLPWNKSQRV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03882 152 PANTHER - 39 131 IPR010264 -
Vifa4g03882 152 Pfam Plant self-incompatibility protein S1 40 146 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03882 Vifa-Chr4 1238980821 1238981279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03882 38 147 Carbohydrate Esterase AT3G16970 44.248 5.84e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03882 - - psat:127136024 275.404