Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03824 ATGGTGAGAGTCAGTGTATTGAACGATGCTCTAAAGAGTATGTACAATGCTGAGAAAAGAGGAAAGCGCCAAGTCATGATAAGGCCATCATCCAAAGTCATTATCAAGTTCCTTATTGTTATGCAGAAGCATGGATATATTGGGGAGTTTGAGTATGTTGATGATCACAGATCTGGAAAGATTGTTGTTGAGTTGAATGGCAGGTTGAACAAATGTGGGGTTATTAGTCCTCGTTTTGATGTTGGGGTCAAGGAGATTGAAGGTTGGACTGCCAGACTTCTCCCATCTAGACAGTTTGGTTACATTGTTTTGACCACTTCTGCTGGCATTATGGATCACGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAGGTCCTTGGTTTCTTCTACTGA 393 0.4173 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03824 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Vifa4g03824 130 FunFam 40S ribosomal protein S15a 1 69 - -
Vifa4g03824 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vifa4g03824 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vifa4g03824 130 FunFam 40S ribosomal protein S15a 70 130 - -
Vifa4g03824 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vifa4g03824 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Vifa4g03824 130 Gene3D - 70 130 - -
Vifa4g03824 130 Gene3D - 1 69 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa4g03824 Vifa-Chr4 1225381481 1225382288 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03824 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 99.231 3.20e-94 265
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03824 K02957 - fve:101302049 261.536