Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03811 ATGATGAATATATTTTCGGTGTGTGGTGCTGTTTCTTCTGCTTGCAAGCCCATGATGAGATTCCAAGCGCCAGTAATGGATAATGATAATTTACGGTTTCAACAACATCGTAAAGAGAAAGTTGTTGTTGTCATGGGTGCTACCGGAACCGGGAAATCCAAGTTGGCTATAGAGTTAGCAAACCATTTTCCACCGGCAGAGATTATAAACTCAGACAAAATGCAAGTGTACAAAGGACTTGACATCACAACAAACAAAGTCACCGAGGAAGAGTGTCGTGGGGTTCCACATCATTTACTTGGAACCATTCATCCTGATTCGAGTTTCACATCGAACGAGTTTTGCGAACACGCGACGCTCGCTATTGGGTCCATCTTGGGAAGAGACGGGTTACCTATTATAGCTGGCGGTTCAAATTCGTACATTGAAGCATTGGTTAATCATCACCATGAGTTTCGCATGAAGTACGAATGTTGTTTTCTGTGGGTGGATGTTTCTATTCCCGTGCTTCACTCGTCTTTATCCTCACGTGTGGATCGCATGATTGAAGCGGGTCAAGTGAATGAAGTTCGTGAGTTTTTCAACCAAAAAGATTTTGATTACGATTACACTAGAGGGATACGAAGAGCCATTGGTGTACCTGAATTTGACGAGTTTTTTAGAGCGGAGTCACAAGGTGTAACAGATGGAAGAACTATGAAGAAGCTTCTAGAAGTAGCTACTGATGCTCTTAAAGTGAATAACTGTAAGCTTGCGAGTAAACAAGTTGAGAAGATACATAGGCTTTATGGTATTTGGAAAAAGAACATGCACCGTCTTGATGCTACGGAGGTTGTGCTTAAGGAAGATAATTGGGAGGATCGTGTGTTGGCAAAGAGTCTTAGGATTGTACACAAGTTTCTATACGAGGATGGTGGTAATGGTGGTTGTATTGAGCCTGCAAAAATTCCGATTGTGGCAGGGGTAACCCATTAG 975 0.4236 MMNIFSVCGAVSSACKPMMRFQAPVMDNDNLRFQQHRKEKVVVVMGATGTGKSKLAIELANHFPPAEIINSDKMQVYKGLDITTNKVTEEECRGVPHHLLGTIHPDSSFTSNEFCEHATLAIGSILGRDGLPIIAGGSNSYIEALVNHHHEFRMKYECCFLWVDVSIPVLHSSLSSRVDRMIEAGQVNEVREFFNQKDFDYDYTRGIRRAIGVPEFDEFFRAESQGVTDGRTMKKLLEVATDALKVNNCKLASKQVEKIHRLYGIWKKNMHRLDATEVVLKEDNWEDRVLAKSLRIVHKFLYEDGGNGGCIEPAKIPIVAGVTH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03811 324 FunFam Adenylate isopentenyltransferase 5, chloroplastic 167 270 - -
Vifa4g03811 324 Gene3D - 38 301 IPR027417 -
Vifa4g03811 324 ProSiteProfiles Guanylate kinase-like domain profile. 39 127 IPR008144 -
Vifa4g03811 324 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 270 - -
Vifa4g03811 324 Pfam IPP transferase 75 149 - -
Vifa4g03811 324 Pfam IPP transferase 153 256 - -
Vifa4g03811 324 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 38 301 IPR039657 -
Vifa4g03811 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 197 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03811 Vifa-Chr4 1222624368 1222625342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03811 155 308 C2H2 Transcription Factor Family AT2G27760 28.177 2.38e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03811 K10760 - gmx:100778430 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03811 4 1222624368 1222625342 Vifa1g10010 1 1646416790 1646417882 PCT