Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g03797 | ATGTTTCCAACCAATTTTTCTTTCTTCTTTGTCTTCCTCTCTGTGACATCTCACTCTTTTGCTGCAGCCACCACTTCTTGGGTGAAGGCTGGTTATTACTATTCCGGCAGTGAAATTTCAGCTTCAGAAATTAAATCAACACTTTTCACACACCTCTTATGTGCTTTTGCTTTTATAAACTCCACAAACTATAATATCTTTATAAACTCTTCTGAAGAACACAAATTCTCCACCTTCACCAACACAGTAAAGCTTCAAAACCCATCTGTTATAACTCTTCTTTCAATCTACACCGGAAGAGAAAACTCTTCGGCTTTCAACTCAATCATAAACCAATCTTCTTACAGAAAATCTTTCATTGATTCTTCCATCAAAACAGCAAGGAAATATGAGTTTCAAGGCATAGACCTTTGTGGAGTCTCACCAAAGCAAGGTAAAGAGCTTGCGAATTTCGCAACCCTTTTGAAAGAGTGGCGAATCGCGATAACTTCTGAGGCAAGAAACACCAAAAAGACAGAACTAGTGTTGGTGATGGCAGGTTATTATCTCAAAGCTTCAGATTCATTTAGTTACCCTTTTGAATCAATGCAGAAGAATCTGGACTGGGTTCATTTTGTTGCATATGATTACTATCTTCCCAAAAAGGATATTGTCACAGGTTTTCATGCAGCGTTATATGGTTCATCTGGTTGGGAAAATACTGATTCTGGTATCCAAGAGTGGAGAAAGAGAGGATTTTCTTCAAACAAGCTTGTAATTGGTTTGCCTTATCATGGATATGCATGGACACTTGTGAAACAAGGTGAAGAGGGTGTTGGAAAACCAGCTTTTGGTCCTGCTATTACTATGGATGGTTCTATGTCTTATAAGTTGATAAAAAGTTACATTAGAAGCTTTGGAGGTGGAGTAGTTTCAAGTTTTAATGATACTTTTGTGGTCAATCATTTCACTGTTGCTTCCACTACATGGGTTAATTTTGATGATGTGGAAGCTATTAAAGAAAAAGTTTCTTATGTGAAGAAGAATGGATTACTTGGTTACAATGTTTTCCAAGTTGGGAATGATGAAAACTGGGTCCTTTCAAAGGCAGCTCAAGAAGTAGATGAAGACCATCATAACAGAAGGTTGCTAATAATTGTTCTGCTTACAACTTTGACTGCTGCACTTCTCTTGGGAATAGTATTTTGCTACTACTACCAAGGAACAGTGGCCATTCTTACAAGAATGATATACAAATTGAGTATATATTTATCAGCAGCTGAAGAAGATCTTAGTGGAAATGCTTCTGATTTGATAGTATTTGGTTATCTCACAATTAAAGTAGCAACAGATAACTTCTCAAAAGAAAATAAGCTCGGAGAAGGTGGATTTGGTGCAGTGTATAAGGGAAAATTACGAAAGGGACAGGAAATAGCCGTCAAAAGACTCTCAGAAAACTCGAATCAAGGACTTGAAGAGTTCAAAAATGAGATCACACTCACAGCAAGATTACAACATGTTAATTTAGTTAGGCTTTTGGGTTACTGCACAAAAAAGAATGAGAAGCTTCTCATATATGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTCTAGATTGGAGGAAGCGTGTGAATATCATTGAAGGAATTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGACCATGAGATGAATGCTAAGATATCAGATTTTGGTATGGCTAGAATTTTCGGGAAGTACGAACATGAAGCAAACACAAGCAGGATTGTGGGGACATACGGGTATGTACCTCCCGAGTATGTAAGAAAAGGCATATACTCACCCAAATACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATTATAAGTGGAAAGAGGACTTCACAATATTACGGTCCGCATGAAAATATGAATCTTTTGGAATATGCATATGAGCTGTGGATGGAAGGAACAATTTTGGAATTTTTGGACCCTTCATTGGATGATTCAACATCTCATTGTAAAATCATGAGATGCATGCAGGTAGCTCTTTTGTGTGTTCAAGAGAATTCAGCAGATAGACCTTCCATGCTAGAAGTTGATTCACTGCTCAAAAATGAAGGTACACCAGTTGGTACTCCCAACATGCCAGCTTTTTCGATGAAAATACACGGAGATGATAAAGGAGATACATCTAACTCAAGGTTGAAATTTTCTTCCATCAATGATGTTACCATTTCTGAGATGGTACCAAGATAA | 2298 | 0.3699 | MFPTNFSFFFVFLSVTSHSFAAATTSWVKAGYYYSGSEISASEIKSTLFTHLLCAFAFINSTNYNIFINSSEEHKFSTFTNTVKLQNPSVITLLSIYTGRENSSAFNSIINQSSYRKSFIDSSIKTARKYEFQGIDLCGVSPKQGKELANFATLLKEWRIAITSEARNTKKTELVLVMAGYYLKASDSFSYPFESMQKNLDWVHFVAYDYYLPKKDIVTGFHAALYGSSGWENTDSGIQEWRKRGFSSNKLVIGLPYHGYAWTLVKQGEEGVGKPAFGPAITMDGSMSYKLIKSYIRSFGGGVVSSFNDTFVVNHFTVASTTWVNFDDVEAIKEKVSYVKKNGLLGYNVFQVGNDENWVLSKAAQEVDEDHHNRRLLIIVLLTTLTAALLLGIVFCYYYQGTVAILTRMIYKLSIYLSAAEEDLSGNASDLIVFGYLTIKVATDNFSKENKLGEGGFGAVYKGKLRKGQEIAVKRLSENSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKKNEKLLIYEYLPNKSLDHFLFDPRKSILLDWRKRVNIIEGITQGLLYLQEYSNFTIIHRDLKASNVLLDHEMNAKISDFGMARIFGKYEHEANTSRIVGTYGYVPPEYVRKGIYSPKYDVYSFGVLLLQIISGKRTSQYYGPHENMNLLEYAYELWMEGTILEFLDPSLDDSTSHCKIMRCMQVALLCVQENSADRPSMLEVDSLLKNEGTPVGTPNMPAFSMKIHGDDKGDTSNSRLKFSSINDVTISEMVPR | 765 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g03797 | 765 | CDD | STKc_IRAK | 452 | 719 | - | - | |
Vifa4g03797 | 765 | SUPERFAMILY | (Trans)glycosidases | 30 | 356 | IPR017853 | - | |
Vifa4g03797 | 765 | FunFam | Uncharacterized protein | 422 | 521 | - | - | |
Vifa4g03797 | 765 | ProSiteProfiles | Glycosyl hydrolases family 18 (GH18) domain profile. | 27 | 371 | IPR001223 | GO:0005975 | |
Vifa4g03797 | 765 | Pfam | Protein kinase domain | 446 | 710 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03797 | 765 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 733 | IPR011009 | - | |
Vifa4g03797 | 765 | Gene3D | Glycosidases | 42 | 356 | - | - | |
Vifa4g03797 | 765 | SMART | 2g34 | 27 | 355 | IPR011583 | GO:0008061 | |
Vifa4g03797 | 765 | FunFam | Uncharacterized protein | 522 | 727 | - | - | |
Vifa4g03797 | 765 | ProSitePatterns | Protein kinases ATP-binding region signature. | 452 | 474 | IPR017441 | GO:0005524 | |
Vifa4g03797 | 765 | Gene3D | - | 257 | 326 | IPR029070 | - | |
Vifa4g03797 | 765 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 82 | 762 | - | - | |
Vifa4g03797 | 765 | SMART | serkin_6 | 446 | 717 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03797 | 765 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 567 | 579 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa4g03797 | 765 | Pfam | Glycosyl hydrolases family 18 | 32 | 355 | IPR001223 | GO:0005975 | |
Vifa4g03797 | 765 | Gene3D | Transferase(Phosphotransferase) domain 1 | 522 | 722 | - | - | |
Vifa4g03797 | 765 | ProSiteProfiles | Protein kinase domain profile. | 446 | 717 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03797 | 765 | Gene3D | Phosphorylase Kinase; domain 1 | 421 | 521 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g03797 | Vifa-Chr4 | 1214843211 | 1214846365 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g03797 | 434 | 765 | Receptor kinase-like Gene Family | AT4G11530 | 52.522 | 7.04e-116 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa4g03797 | Glyco_hydro_18 | 1.7e-52 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g03797 | - | - | tpra:123922687 | 1298.11 |