Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03795 ATGTTTTCAAAACATTTTTCTTTCTTCCTTGTTGTCCTTCTCTTCTTCCCTCTCACATCTCCCTCTTTTGCAGCAGACACCACTTCTTGGGTAAAAGCAGGCTATTACTATTCCGGCAATGAAATTTCAGCTTCAGAAATTAAATCAACACTTTTCACACACCTCTTATGTGCTTTTGCTTTTATAAACTCCACAAACTACAACGTCTTTATTAATTCTTCTGAAGAACACAAGTTCTCCACCTTCACCAACTCAGTAAAGTTTCAAAACCCATCTGTTATAACTCTTCTATCAATCTACACCGGAGGAGAAAACTCTTCAGTTTTCAACTCAATGATAAACCAATCTTCTTACAGAAAATCGTTCATTGATTCTTCCATCAAAACGGCGAGAAAATATGGGTTTCAAGGCATAGACCTTTGTGGAGTCTTACCAAAGCAAGCTAAGGAGCTTGCAAATTTCGCAACCCTTTTGAAAGAATGGCGAAACGCGATAACTTCTGAGGCAAGAAACACTAAGAAAATAGACTTAGTGTTGGTGATGGCAGGTTATTATATCCATGCATCAGATTCATTTAGTTATCCATTTGAATCAATGCAGAAGAATTTGGATTGGGTTCATTTTGTTGCATATGATTACCATCTTCCTGAAAAGGAGAGTGTCACAGGTTTTCATGCAGCTTTATATGGTTCATCTGGTTGGGAAAACACTGATTCTGGTATCAAAGAGTGGAGAAAGAGAGGGTTTTCTTCAAACAAACTTGTAATTGGTTTACCTTATCATGGATATGCATGGAGACTTATGGAACAAGGTGAAGGGGGTGTTGGAAAACCAGCTTCAGGTTCAGATATTACGAAGGATGGTTCTATGGGTTATAAGTGGATAAAAAGTTACATTAAAAGCTTTGGAGATGGACTAGTTTCAAGCTATAATGATACTTTTATGGTGAATTATTTCACCGTTGCTTCTACTACATGGGTTAATTTTGATGATGTGGAAGCTATTAAAGAAAAAGTTTCTTATGCAAAGAAAAATGGATTACTTGGTTACAATGTGTTCCAAGTTGGGAACGATCATAATTGGGTCCTTTCAATGGCAGCAGCTCAAGAAGTAGATGAAGATCATCATAACAAAAAATTACTGATAATTGTTCTGCTTACAATTATGACTGTTGCTCTTCTCTTGGGAACAGTATTTTGTTGCTACTACTACCAAAGAACCATAACCATTATTACAAAAATGATATACAAATTGAAGATATACTTATCCTCAGCTGAAGAAGATGTTGATGAAGAGTCTTATGATTTGATAGTATTTGGTTATCTCACAATTAAAGTAGCAACAGATAACTTCTCAAAAGAAAATAAGCTGGGAGAAGGTGGATTTGGTGCAGTGTATAAGGGAAAATTACGAAAGGAACGGGAAATAGCTGTCAAAAGACTATCAAAAACCTCAACTCAAGGACTTGAAGAGTTCAAAAATGAAATCATGCTTACAGCAAGACTACAACATGTTAATTTAGTTAGACTTTTGGGTTACTGCACGAAAAAGAATGAGAAGCTTCTCATCTATGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAAGTCTTCTATATTGGAAGAAACGTGTGAATATCATTGAAGGGATTACTCATGGTCTTATTTATCTCCAAGAGTATTCGAATTGTACTATAATCCACCGAGACCTTAAGGCTAGTAATATTTTGTTAGACAGTGAGATGAATCCTAAGATAGCCGATTTTGGTCTTGCTAGAATTTTCGGAAAGAATGAACTTGAAGCAAATACAAGTAGGATCGTGGGAACATATGGGTATGTACCTCCCGAGTATGTCAGAAAAGGCATATACTCACTCAAGTATGATGTTTATAGTTTTGGAGTCCTTCTCTTGCAAATCATAAGTGGGAATAGATCTTCATATTATTACGGTCCAGATGAAAATATGAACCTTTTAGAATATGCATATGAGCTATGGATGGAAGGGAGAGGTGTGGAGTTTTTGGACCCTTCATTGGATGATTCAACATCTGATTGTAAAATCATGAGATGCATGCAGATAGGTCTTTTGTGCGTTCAAGATAATTCGGCAGATAGACCTTCTATGTTAGAAGTTGATTCACTTATCAAGAACGAAGGCACACTCGTCGATACTCCCAAAATGCCAGCTTTTTCGATGAAAAAACATGGATCTAACTCCAGATTAAAATTTCCTTCAATCAATGATGTTACAATTTCAGAGATGGTAGCAAGATAA 2295 0.3608 MFSKHFSFFLVVLLFFPLTSPSFAADTTSWVKAGYYYSGNEISASEIKSTLFTHLLCAFAFINSTNYNVFINSSEEHKFSTFTNSVKFQNPSVITLLSIYTGGENSSVFNSMINQSSYRKSFIDSSIKTARKYGFQGIDLCGVLPKQAKELANFATLLKEWRNAITSEARNTKKIDLVLVMAGYYIHASDSFSYPFESMQKNLDWVHFVAYDYHLPEKESVTGFHAALYGSSGWENTDSGIKEWRKRGFSSNKLVIGLPYHGYAWRLMEQGEGGVGKPASGSDITKDGSMGYKWIKSYIKSFGDGLVSSYNDTFMVNYFTVASTTWVNFDDVEAIKEKVSYAKKNGLLGYNVFQVGNDHNWVLSMAAAQEVDEDHHNKKLLIIVLLTIMTVALLLGTVFCCYYYQRTITIITKMIYKLKIYLSSAEEDVDEESYDLIVFGYLTIKVATDNFSKENKLGEGGFGAVYKGKLRKEREIAVKRLSKTSTQGLEEFKNEIMLTARLQHVNLVRLLGYCTKKNEKLLIYEYLPNKSLDHFLFDPRKSSLLYWKKRVNIIEGITHGLIYLQEYSNCTIIHRDLKASNILLDSEMNPKIADFGLARIFGKNELEANTSRIVGTYGYVPPEYVRKGIYSLKYDVYSFGVLLLQIISGNRSSYYYGPDENMNLLEYAYELWMEGRGVEFLDPSLDDSTSDCKIMRCMQIGLLCVQDNSADRPSMLEVDSLIKNEGTLVDTPKMPAFSMKKHGSNSRLKFPSINDVTISEMVAR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03795 764 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
Vifa4g03795 764 Pfam Protein kinase domain 451 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g03795 764 ProSiteProfiles Protein kinase domain profile. 451 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g03795 764 SUPERFAMILY (Trans)glycosidases 33 359 IPR017853 -
Vifa4g03795 764 SMART 2g34 30 358 IPR011583 GO:0008061
Vifa4g03795 764 FunFam Uncharacterized protein 426 526 - -
Vifa4g03795 764 Gene3D - 260 329 IPR029070 -
Vifa4g03795 764 CDD GH18_plant_chitinase_class_V 28 364 - -
Vifa4g03795 764 Gene3D Transferase(Phosphotransferase) domain 1 527 730 - -
Vifa4g03795 764 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 30 374 IPR001223 GO:0005975
Vifa4g03795 764 Pfam Glycosyl hydrolases family 18 35 358 IPR001223 GO:0005975
Vifa4g03795 764 Gene3D Phosphorylase Kinase; domain 1 425 526 - -
Vifa4g03795 764 SUPERFAMILY Protein kinase-like (PK-like) 433 738 IPR011009 -
Vifa4g03795 764 Gene3D Glycosidases 45 359 - -
Vifa4g03795 764 SMART serkin_6 451 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g03795 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Vifa4g03795 764 CDD STKc_IRAK 457 718 - -
Vifa4g03795 764 FunFam Uncharacterized protein 527 732 - -
Vifa4g03795 764 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 90 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03795 Vifa-Chr4 1214814649 1214831911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03795 439 764 Receptor kinase-like Gene Family AT4G11530 51.632 3.96e-114 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifa4g03795 Glyco_hydro_18 1.9e-52 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03795 - - psat:127073424 1276.15