Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g03793 | ATGTTTTCAAAACTTTTAGCTTTCTTCCTTAGTGTCCTTGTCTTCTTCCCTCTCACATTTGACTCATTTGCAGATACAACTTCCTGGGTTAGAGCAGGTTATTACCATACCGAAAGTGAAATTTCAGCTTCAGAAATTAAATCAACACTTTTCACACATCTCTTATGTGCTTTTGCTTTTATAAACTCCACGAACTACAACGTCTTTATTAACTCTTCTCAGGAACTCAAGTTCTCATCCTTCACCAACTCAGTAAAGTTTCAAAACCCATATGTTACATCTCTTCTATCAATCAATGGTGGAAGAGAAAACTCTTCACTTCTTAGCTCAATGATAAACCAATCTTCCTACAGAAAATCATTCATTGACTCTTCTATCAAAACAGCAAGAAAATATGGATTTCAAGGCATAGACTTTCGTGGGGCCAGGCCAAAGCTAGGTAAAGAGCTTGCAAATTTTGCAACCCTTTTGAAAGAGTGGCGAATCGCAATAACTTCTGAAGCAAGAAACATTAAAAAACCAGATTTAGTTTTGGTGATGGCGGGTTATTATCTCAAAGCTTCAGATTCCTTTAGTTACCCTTTTGAATCTATGCAGAAAAATTTAGATTGGGTTCATTTTGTTGCATATGATTACCATCTTCCTGAAAAGGAGAGTGTCACAGGTTTTCATGCAGCTTTATATGGTTCATCTGGTTGGGAAAATACTGATTCTGGTATCAAAGAGTGGAGAAAGAGAGGGTTTTCTTCAAACAAACTTGTAATTGGTTTACCTTATCATGGATATGCATGGAGACTTATGGAACAAGGTGAAGGGGGTGTTGGAAAACCAGCTTCTGGTCCTGCTATTACTAAGGATGGTTCTATGGGTTATAAGTGGATAAAAAGTTACATTAAAAGCTTTGGAGATGGACTAGTTTCAAGCTATAATGATACTTTTATGGTGAATTATTTCACTATTGCTTCCATTGCTTGGGTTAACTTTGATGATGTGGAGGCTATTAAAGAAAAAGTTTCTTATGCAAAGAAAAATGGATTACTTGGTTACATTGTGTTCCAAGTTGGGAATGATGACAATTGGGTCCTTTCAACGGCAGCTCAAGAAGTAGATGAAGACCATCATAACAGAAGGTTGCTAATAATTGTTCTGCTTACAATTTTGGCTACTGCACTTCTCTTGGGAATAGTATTTTGCTGCTACTACCAAGCAGGAACAGTGGCCATTCTTACAAGAATGATATACAAACTGAGTATATATTTATCAGCAGCTGAAGAAGATCTTAGTGGAAATGCTTCTGATTTGATAGTATTTGGTTATCTCACAATTAAAGTAGCAACAGATAACTTCTCAACAGAAAATAAGCTGGGAGAAGGTGGATTTGGTGCTGTGTATAAGGGAAAATTAGGAAAGGGACAGGAAATAGCCGTGAAAAGACTCTCAGAAACTTCAAATCAAGGACTTGAAGAGTTCAAAAATGAGATCACACTCACAGCAAGATTACAACATGTTAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAAGAATGAGAAGCTTCTCATCTATGAATACCTCCCAAATAAAAGCTTAGATCATTTTCTCTTTGATCCAAGGAAATCAATTCTTCTAGATTGGAGGAAGCGTGTGAATATCATTGAAGGAATTACTCAAGGCCTTCTTTATCTCCAAAAAATTTTTGGAAAGAATGAACTAGAAGCAAATACAACTAGGATCGTCGGAACATATGGATACGTACCTCCCGAGTATGTCAGAAAAGGCATATACTCACTCAAGTATGATGTTTATAGTTTTGGAGTCCTTCTCTTGCAAATCATAAGTGGGAAGAGATCTTCACATTATTACGGTCCAGATGAAAATATGAACCTTTTAGAATACGCATATGAGCTGTGGATGGAAGGAAGAGGCGTGGAGTTTTTGGACCCTACATTGGATGATTCAACATCTGATTGTAAAATCATGAGATGCATGCATATAGGTCTTTTGTGCGTTCAAGATAATTCGGTAGATAGACCTTCTATGTTAGAAGTTGATTCACTACTCAGGAATGAAGGCACACTCGTCGATACTCCCAAAATGCCAGCTTTTTCGATGAAAAAACACGGATCTAACTCAAGATTAAAATTTCCTTCAATCAATGATGTTACAATTTCAGAGATGGTAGCAAGATAA | 2190 | 0.3662 | MFSKLLAFFLSVLVFFPLTFDSFADTTSWVRAGYYHTESEISASEIKSTLFTHLLCAFAFINSTNYNVFINSSQELKFSSFTNSVKFQNPYVTSLLSINGGRENSSLLSSMINQSSYRKSFIDSSIKTARKYGFQGIDFRGARPKLGKELANFATLLKEWRIAITSEARNIKKPDLVLVMAGYYLKASDSFSYPFESMQKNLDWVHFVAYDYHLPEKESVTGFHAALYGSSGWENTDSGIKEWRKRGFSSNKLVIGLPYHGYAWRLMEQGEGGVGKPASGPAITKDGSMGYKWIKSYIKSFGDGLVSSYNDTFMVNYFTIASIAWVNFDDVEAIKEKVSYAKKNGLLGYIVFQVGNDDNWVLSTAAQEVDEDHHNRRLLIIVLLTILATALLLGIVFCCYYQAGTVAILTRMIYKLSIYLSAAEEDLSGNASDLIVFGYLTIKVATDNFSTENKLGEGGFGAVYKGKLGKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKKNEKLLIYEYLPNKSLDHFLFDPRKSILLDWRKRVNIIEGITQGLLYLQKIFGKNELEANTTRIVGTYGYVPPEYVRKGIYSLKYDVYSFGVLLLQIISGKRSSHYYGPDENMNLLEYAYELWMEGRGVEFLDPTLDDSTSDCKIMRCMHIGLLCVQDNSVDRPSMLEVDSLLRNEGTLVDTPKMPAFSMKKHGSNSRLKFPSINDVTISEMVAR | 729 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g03793 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 424 | 524 | - | - | |
Vifa4g03793 | 729 | SUPERFAMILY | (Trans)glycosidases | 32 | 358 | IPR017853 | - | |
Vifa4g03793 | 729 | Gene3D | Glycosidases | 44 | 359 | - | - | |
Vifa4g03793 | 729 | Pfam | Protein tyrosine and serine/threonine kinase | 451 | 564 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa4g03793 | 729 | Pfam | Glycosyl hydrolases family 18 | 32 | 357 | IPR001223 | GO:0005975 | |
Vifa4g03793 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 564 | 695 | - | - | |
Vifa4g03793 | 729 | ProSiteProfiles | Glycosyl hydrolases family 18 (GH18) domain profile. | 29 | 373 | IPR001223 | GO:0005975 | |
Vifa4g03793 | 729 | ProSiteProfiles | Protein kinase domain profile. | 449 | 687 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03793 | 729 | ProSitePatterns | Protein kinases ATP-binding region signature. | 455 | 477 | IPR017441 | GO:0005524 | |
Vifa4g03793 | 729 | FunFam | Uncharacterized protein | 425 | 524 | - | - | |
Vifa4g03793 | 729 | SMART | 2g34 | 29 | 357 | IPR011583 | GO:0008061 | |
Vifa4g03793 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 433 | 704 | IPR011009 | - | |
Vifa4g03793 | 729 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 307 | 564 | - | - | |
Vifa4g03793 | 729 | Gene3D | - | 259 | 328 | IPR029070 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g03793 | Vifa-Chr4 | 1214680965 | 1214684069 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g03793 | 437 | 729 | Receptor kinase-like Gene Family | AT4G11530 | 45.104 | 3.74e-91 | 297 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vifa4g03793 | Glyco_hydro_18 | 2.3e-51 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g03793 | - | - | psat:127073424 | 1142.87 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa4g03793 | 4 | 1214680965 | 1214684069 | Vifa4g03793 | 4 | 1214680965 | 1214684069 | ECH |