Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa4g03789 | ATGTCGTCTGATAATCTATTTGAAGACCTCAAGAAAGAGAATATTGATCTGGAAAACATTCCTATTGAGGAAGTTTTCAAGCAGCTAAAATGTAGCAAAGAAGGTCTAACATCAGCTGAGGGAGAGAGTAGGCTAGTAATATTTGGTCCTAATAAATTAGAAGAGAAAACAGAGTGCAAGTTCCTTAAGTTCTTAGGTTTCATGTGGAATCCGTTATCATGGGTTATGGAGGTTGCTGCTCTTATGGCCATTGGATTGGCCAATGGAGGGGGCAAGCCCGCGGATTGGCAAGATTTCGTTGGTATTGTTGTGTTGCTTGTCATCAACTCAACCATTAGTTTCATTGAAGAAAACAATGCTGGTAACGCGGCAGCAGCTTTGATGGCCGGTCTTGCACCTAAAACCAAGGTATTGAGGGATGGAAAATGGACTGAGCAAGAGGCGTCAATTTTGGTGCCAGGAGATTTGGTGAGTATCAAGTTGGGAGATATTGTTCCTGCTGATGCTCGTCTCTTGGAAGGAGATCCTCTTAAGATTGACCAATCTGCACTTACTGGTGAGTCACTTCCGGTTACCAAGAACCCTGGTGATGAAGTCTTCTCTGGTTCAACCTGTAAACAAGGTGAGATTGAGGCTATTGTCATTGCCACCGGTGTCCATACTTTCTTTGGAAAGGCTGCTCACCTTGTTGATAGCACCAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCGATCGGAAACTTCTGTATCTGCTCCATTGCAGTAGGAATGTTGATTGAGATTATTGTGATGTACCCAATTCAACAAAGGGCGTACAGAGAAGGTATTGACAATTTGTTGGTTCTTCTCATCGGAGGTATCCCAATCGCCATGCCAACGGTTTTGTCCGTGACAATGGCTATTGGCTCTCACCGTTTGTCTCAGCAAGGAGCTATCACCAAGAGGATGACAGCTATTGAAGAAATGGCTGGAATGGATGTTCTCTGCAGTGACAAGACCGGAACTCTCACACTTAACAAACTCTCTGTTGACAAAAACTTGATTGAGGTGTTTGTTAATGACGTAGACAAGGACGGTCTTCTCTTGGTTGCTGCCAGGGCTTCAAGGGTTGAAAACCAAGATGCCATTGATGCTTCAATCGTTAATATGTTGGGTGATCCCAAGGAGGCAAGAGCCGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCAGTGGGAAAACGCACTGCTATTACATACATTGATGGCGAGGGAAATTGGCACAGATGCAGCAAGGGTGCTCCAGAACAAATTATTGAGCTGTGTGAACTCAAGGGAGAGACTTTGAAAAAGGCCCACAAAATCATTGATCAGTTTGCTGAACGAGGTCTGCGTTCATTGGCTGTTTCTCGTCAGACTGTTTCAGAAAAGACCAAGGAGAGTGAAGGAGAAGCATGGGAGTTTTTGGGTCTGATGCCACTCTTTGACCCTCCTAGACATGACAGTGCTGAGACTATTCGACGTGCTCTTGACCTCGGCGTTAATGTTAAGATGATCACTGGTGACCAACTTGCCATTGGAAAAGAAACCGGTCGCAGACTCGGAATGGGAACCAACATGTATCCTTCATCATCCCTTCTTGGTGATAACAAGGACCCTGCCATTGCATCAATCCCAATTGACGAACTCATTGAGAAGGCTGATGGATTCGCCGGAGTCTTCCCTGAACACAAGTACGAGATTGTGAAAAGGCTGCAAGATAGAAAACACATCTGTGGTATGACTGGTGATGGTGTGAATGATGCACCTGCATTGAAGAAAGCAGACATCGGTATCGCTGTTGCTGATGCAACTGATGCTGCGAGAAGTGCTTCTGACATTGTTTTGACAGAGCCAGGTCTAAGTGTGATTGTGAGTGCTGTGTTAACTAGCAGAGCCATCTTCCAAAGGATGAAAAACTACACAATCTACGCCGTTTCTATCACCATCCGTATCGTGTTTGGATTCATGCTTGTTGCTTTGATATGGAAGTTTGATTTCTCACCCTTCATGGTCCTCATCATTGCCATTTTGAATGATGGAACCATCATGACCATCTCTAAGGATAGAGTGAAGCCTTCACCGGTTCCTGATTCATGGAAACTCAAAGAAATCTTTGCTACCGGAATTGTTCTTGGATCTTACATGGCCATCATCACTGTTGTGTTCTTCTATTTAGTTCATGACACCGATTTCTTCACCAGAGTTTTTAATGTGAAGCCAATTGGAGACAGTAACGATCATCTTAACTCAGCTCTGTACCTTCAAGTCAGTATTATAAGTCAAGCACTCATCTTTGTGACAAGGTCAAGGAGTTGGTCTTATGTCGAACGCCCCGGCTTTTTGCTTATCGCAGCCTTCTTTGCTGCACAACTGGTGGCCACTGTCATTGCTGTGTATGCACATTGGGGATTTGCTAGAATCAATGGCATTGGTTGGGGATGGGCAGGAGCAATCTGGATCTTCAGCATTGTTACTTACATTCCTCTCGACATCCTTAAATTCATGATCCGATTGGGATTGTCAGGAAGGGCATGGGACAACATGCTCGACAATAAGACCGCATTCACAACCAAGAAGGACTATGGAAAAGGCGAGAGGGAAGCACAATGGGCCTTGGCTCAACGCACGCTCCACGGTCTTCAAGTTCGGGAATCACATAAGAACAACAGCAATCACCATGATCAATCATCTGACATGGCTGAACAAGCCAAGAGGCGCGCCGAGGCTGCTAGGTTGAAAGAGCTCCATACACTCAAGGGACATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACATTGATACCATTCAACAACATTACACACTCTAA | 2853 | 0.4483 | MSSDNLFEDLKKENIDLENIPIEEVFKQLKCSKEGLTSAEGESRLVIFGPNKLEEKTECKFLKFLGFMWNPLSWVMEVAALMAIGLANGGGKPADWQDFVGIVVLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEQEASILVPGDLVSIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIAVGMLIEIIVMYPIQQRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVNDVDKDGLLLVAARASRVENQDAIDASIVNMLGDPKEARAGITEVHFLPFNPVGKRTAITYIDGEGNWHRCSKGAPEQIIELCELKGETLKKAHKIIDQFAERGLRSLAVSRQTVSEKTKESEGEAWEFLGLMPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNKDPAIASIPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFATGIVLGSYMAIITVVFFYLVHDTDFFTRVFNVKPIGDSNDHLNSALYLQVSIISQALIFVTRSRSWSYVERPGFLLIAAFFAAQLVATVIAVYAHWGFARINGIGWGWAGAIWIFSIVTYIPLDILKFMIRLGLSGRAWDNMLDNKTAFTTKKDYGKGEREAQWALAQRTLHGLQVRESHKNNSNHHDQSSDMAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIDTIQQHYTL | 950 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa4g03789 | 950 | FunFam | ATPase 4 plasma membrane-type | 574 | 816 | - | - | |
| Vifa4g03789 | 950 | SUPERFAMILY | Calcium ATPase, transduction domain A | 133 | 230 | IPR008250 | - | |
| Vifa4g03789 | 950 | Gene3D | - | 900 | 950 | - | - | |
| Vifa4g03789 | 950 | Pfam | haloacid dehalogenase-like hydrolase | 326 | 603 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 330 | 344 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 589 | 608 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 180 | 194 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 612 | 624 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 506 | 516 | - | - | |
| Vifa4g03789 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 484 | 495 | - | - |
Showing 1 to 10 of 36 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa4g03789 | K01535 | - | gmx:100798717 | 1655.96 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vifa4g03789 | 4 | 1212274423 | 1212278685 | Vifa4g03789 | 4 | 1212274423 | 1212278685 | ECH |
Showing 1 to 1 of 1 entries