Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03714 ATGGGAGCAGTTATTCTCCCAGATCTCGGTACCGAGATTTTGATTCCTGTTTGCGCCGTTATCGCAATCGCTTTTGCGCTTTTCCAATGGCTTCTTGTTTCTAAGGTTAAGCTCACTGCTGGAAGAGAGACTGTCCCTGAAACGCCCGGGAAGAATGGGTACAACGATTCGCTCATCGAGGAAGAGGAGGGGATTAACGACCATAACGTTGTTCTCAAATGTGCTGAAATCCAGAACGCTATCTCCGAAGGATCCACATCTTTTCTTTTCACTATGTACAAGTATGTGGGAGTCTTCATGGTGGCTTTTGCCATCTTGATATTCCTTTTCCTTGGTTCTGTGGAAGGATTCAGCACAAGCCATCAGCCTTGCACTTATGATAAAACTAAGATGTGTAAGCCGGCTCTTGCCACAGCCCTTTTCAGCACCATATCTTTTGTGCTTGGTGGGATCACGTCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCCACCTATGCCAATGCAAGAACCACCTTGGAGGCAAGAAAGAGTGTTGGAAAAGCTTTCATTACCGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCCAATGGTCTTTTGGTTCTTTACATTACCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCTATCACTGGTTATGGTCTTGGTGGTTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTACACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAAGTTGAAAGAAACATTCCTGAGGATGATCCAAGGAATCCTGCTGTTATTGCTGATAATGTTGGTGACAATGTTGGGGATATTGCTGGTATGGGATCCGATCTATTTGGTTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCTTCCATCTCTTCTTTTGGGTTAGATCATCAGTTCACTGCCATGTTGTTCCCTCTCATCATCATACTGATGACTATTGGAATTGCAATTGTTAGTTGGATAGCACTCCCATCTACCTTCACCATCTTCAATTTTGGAGAGCAAAAAGTAGTCAAGAACTGGCAGCTATTCTTGTGTGTTTCTGTTGGTCTTTGGGCAGGGCTTATCATTGGATTTGTTACTGAATACTATACCAGTAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGCAGGACTGGTGCTGCTACCAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAATTAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTACGGTGTTGCTGTAGCTGCACTTGGGATGTTGAGTACTATTGCAACGGGATTAGCCATTGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATCCGTGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCCATTGGAAAGGGTTTTGCTATTGGTTCAGCCGCCCTTGTGTCTCTTGCCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGTATCACAACAGTTGATGTCCTGACTCCCAAGGTTTTCATTGGTCTGCTTGTCGGTGCTATGCTCCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAGCGTTGAAGATGGTTGAGGAAGTCCGCAGGCAATTCAACACCATTCCTGGATTGATGGAGGGAACTGCCAAACCTGACTACGCCACATGTGTTACCATCTCCACCGACGCTTCCATCAAAGAAATGATCCCACCAGGTGCCCTTGTTATGCTAACACCCCTTATTGTTGGGATCTTTTTTGGTGTTGAAACACTATCTGGTGTCCTTGCTGGATCTTTGGTTTCTGGTGTACAGATTGCCATCTCTGCATCCAACACTGGCGGTGCTTGGGATAATGCCAAGAAATACATCGAGGCTGGTGCCTCAGAGCATGCAAGAACTCTTGGTCCAAAAGGGTCAGACCCACACAAGGCAGCAGTTATTGGTGACACCATTGGAGACCCATTGAAGGATACATCTGGACCTTCACTTAACATCCTTATCAAACTGATGGCAGTTGAGTCACTGGTGTTTGCTCCTTTCTTTGCAACCCACGGTGGTCTCCTCTTCAAGTTTTGGTAA 2184 0.4551 MGAVILPDLGTEILIPVCAVIAIAFALFQWLLVSKVKLTAGRETVPETPGKNGYNDSLIEEEEGINDHNVVLKCAEIQNAISEGSTSFLFTMYKYVGVFMVAFAILIFLFLGSVEGFSTSHQPCTYDKTKMCKPALATALFSTISFVLGGITSVISGFLGMKIATYANARTTLEARKSVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGLDHQFTAMLFPLIIILMTIGIAIVSWIALPSTFTIFNFGEQKVVKNWQLFLCVSVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVTISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKFW 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03714 727 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 330 717 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vifa4g03714 727 PIRSF H+-PPtase 11 351 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vifa4g03714 727 PIRSF H+-PPtase 330 725 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vifa4g03714 727 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 717 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vifa4g03714 727 Pfam Inorganic H+ pyrophosphatase 21 712 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Vifa4g03714 727 NCBIfam V-type H(+)-translocating pyrophosphatase 332 722 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03714 Vifa-Chr4 1187211286 1187215113 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03714 5 590 Primary Pumps ATPases AT1G15690 82.484 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03714 K23025 - gmx:100775864 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03714 4 1187211286 1187215113 Vifa4g03714 4 1187211286 1187215113 ECH