LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa4g03686	ATGGCTTTTTCTCTTACAGCAAGAAATCCTACATTCCACACTCACCAATTCACCGCATTATCTCCCTTCAGAGCCAAATCACTCTCCATTCTCAATTTCGCAAAGATGGAAGGAAGTGAAATCACTGAAGTGGCACCGAGAGTAGGTGATGATGATTTGAGTTTGAAGAAGAAGATTTTTGTTGCTGGAGCTACTGGTAGCACTGGGAAAAGAATAGTTGAACAGTTGTTGGCTAAGGGTTTTGCTGTTAAAGCTGGGGTTAGAGATTTGGACAAGGCGAAGACTACACTTTCATCTTCCAATCCATCTCTGCAGTTTGTGAGAGTTGATGTGACAGATGGTTCTGATAAGCTAGCGGAAGCTATTGGCGATGACACTGAAGCAGTAGTTTGTGCTACAGGCTTTAGGCCAGGGTGGGATTTGCTTGCTCCTTGGAAGGTTGACAATTTCGGCACTGTGAACCTTGTTGAAGCATGCAGGAAAGTCAATGTTAACAGATTCATTCTTATAAGTTCCATTTTAGTCAATGGAGCAGCTATGGGACAGCTACTCAATCCAGCTTACATTTTTCTCAATGTTTTCGGCCTCACCTTAGTAGCAAAATTACAGGCAGAAAATCATATCAGGAAATCTGGTATAAATTACACAATAATAAGGCCAGGAGGGTTGAAAAATGATCCTCCTACCGGAAATGTTGTTATGGAGCCAGAGGATACACTATATGAAGGTTCCATATCCAGAGATCAAGTTGCAGAGGTAGCTGTGGAATCATTGGCTTATCCCGAGTCATCTTATAAAGTTGTGGAGATAGTTGCTCGACCCGAAGCTCCTAAACGCGCATACTATGATCTTTTTGGTTCCATAGTTCAGCGATGA	876	0.4235	MAFSLTARNPTFHTHQFTALSPFRAKSLSILNFAKMEGSEITEVAPRVGDDDLSLKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSSSNPSLQFVRVDVTDGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVESLAYPESSYKVVEIVARPEAPKRAYYDLFGSIVQR	291

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa4g03686	291	Gene3D	-	50	280	-	-
	Vifa4g03686	291	Pfam	NAD(P)H-binding	63	259	IPR016040	-
	Vifa4g03686	291	PANTHER	FLAVIN REDUCTASE-RELATED	50	289	-	-
	Vifa4g03686	291	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	57	271	IPR036291	-
	Vifa4g03686	291	CDD	SDR_a5	58	273	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa4g03686	Vifa-Chr4	1176792757	1176795869	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa4g03686	56	188	Monolignol Biosynthesis Gene Families	AT2G33590	32.394	3.03e-08	52.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa4g03686	-		-	gmx:100792523	460.299

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