Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03686 ATGGCTTTTTCTCTTACAGCAAGAAATCCTACATTCCACACTCACCAATTCACCGCATTATCTCCCTTCAGAGCCAAATCACTCTCCATTCTCAATTTCGCAAAGATGGAAGGAAGTGAAATCACTGAAGTGGCACCGAGAGTAGGTGATGATGATTTGAGTTTGAAGAAGAAGATTTTTGTTGCTGGAGCTACTGGTAGCACTGGGAAAAGAATAGTTGAACAGTTGTTGGCTAAGGGTTTTGCTGTTAAAGCTGGGGTTAGAGATTTGGACAAGGCGAAGACTACACTTTCATCTTCCAATCCATCTCTGCAGTTTGTGAGAGTTGATGTGACAGATGGTTCTGATAAGCTAGCGGAAGCTATTGGCGATGACACTGAAGCAGTAGTTTGTGCTACAGGCTTTAGGCCAGGGTGGGATTTGCTTGCTCCTTGGAAGGTTGACAATTTCGGCACTGTGAACCTTGTTGAAGCATGCAGGAAAGTCAATGTTAACAGATTCATTCTTATAAGTTCCATTTTAGTCAATGGAGCAGCTATGGGACAGCTACTCAATCCAGCTTACATTTTTCTCAATGTTTTCGGCCTCACCTTAGTAGCAAAATTACAGGCAGAAAATCATATCAGGAAATCTGGTATAAATTACACAATAATAAGGCCAGGAGGGTTGAAAAATGATCCTCCTACCGGAAATGTTGTTATGGAGCCAGAGGATACACTATATGAAGGTTCCATATCCAGAGATCAAGTTGCAGAGGTAGCTGTGGAATCATTGGCTTATCCCGAGTCATCTTATAAAGTTGTGGAGATAGTTGCTCGACCCGAAGCTCCTAAACGCGCATACTATGATCTTTTTGGTTCCATAGTTCAGCGATGA 876 0.4235 MAFSLTARNPTFHTHQFTALSPFRAKSLSILNFAKMEGSEITEVAPRVGDDDLSLKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSSSNPSLQFVRVDVTDGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVESLAYPESSYKVVEIVARPEAPKRAYYDLFGSIVQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03686 291 Gene3D - 50 280 - -
Vifa4g03686 291 Pfam NAD(P)H-binding 63 259 IPR016040 -
Vifa4g03686 291 PANTHER FLAVIN REDUCTASE-RELATED 50 289 - -
Vifa4g03686 291 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 57 271 IPR036291 -
Vifa4g03686 291 CDD SDR_a5 58 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03686 Vifa-Chr4 1176792757 1176795869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03686 56 188 Monolignol Biosynthesis Gene Families AT2G33590 32.394 3.03e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03686 - - gmx:100792523 460.299