Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03646 ATGTTTCAAATGAAAAACATGACAACTCTCATTGTAATCATTGTGGTTGCAGTGTCACTACAAACCTCAGAAGCTGAAGATTACACAGTAGGAGGAGGTACCATAGGTTGGACTAGTTTTCCACCTCGTGGTTCATCTTTCTATTCCAAATGGGCTGCAAATTTTACATTCAAACTTAACGACAATCTAGTTTTCAACTATGAATCTGGAAGCCACAGTGTTGTTATACTAAACAAACCAAACTATGAAAAGTGTAATGTAAATGATGATATTCAAACCTTTAACAAAGGACCAACCAAAATAACCTTGGATCGAACCGGTGATTTCTACTTTACCTGTAGTTTATCAGGTCATTGCAGCAGTGGCCAAAAGCTAAGTATTAAAGTCACAGACACTGCTTCTTCTGATGTTCCACCGGCTGAAGCTCCACCATCCCTAAGTTTTGGACCAGGTTCTACGGCTACTGCTAGTCCACCACAGAGCTCAGCCTCAACAACACCTATGGCTGCTACTTTTACTCTTCTCCTCATTGCTATTGCCTTCAATTTCTTCTCTCAATTTTAA 564 0.3972 MFQMKNMTTLIVIIVVAVSLQTSEAEDYTVGGGTIGWTSFPPRGSSFYSKWAANFTFKLNDNLVFNYESGSHSVVILNKPNYEKCNVNDDIQTFNKGPTKITLDRTGDFYFTCSLSGHCSSGQKLSIKVTDTASSDVPPAEAPPSLSFGPGSTATASPPQSSASTTPMAATFTLLLIAIAFNFFSQF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03646 187 MobiDBLite consensus disorder prediction 148 162 - -
Vifa4g03646 187 MobiDBLite consensus disorder prediction 132 162 - -
Vifa4g03646 187 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Vifa4g03646 187 ProSiteProfiles Phytocyanin domain profile. 26 131 IPR003245 GO:0009055
Vifa4g03646 187 PANTHER BLUE COPPER PROTEIN 21 152 IPR039391 GO:0009055
Vifa4g03646 187 SUPERFAMILY Cupredoxins 25 129 IPR008972 -
Vifa4g03646 187 Gene3D - 25 140 IPR008972 -
Vifa4g03646 187 FunFam Blue copper 24 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03646 Vifa-Chr4 1157784848 1157785500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03646 25 150 Phytocyanin Superfamily AT2G25060 40.476 9.67e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03646 - - psat:127073536 298.516