Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03625 ATGATTGTGAAATTGTGCTTCCTAGTGATTTTGGTGATGACTTTGACAGTTAAAGCCCAACTGAAAACTGGGTTTTATTCAACTTCATGTCCAACGGCTGAGTCCATCGTTCGGTCCACAGTTGTATCTTACTTCAACAATGATCCAACCATTGCTCCTGCCCTACTGAGACTTCATTTCCATGACTGCTTTGTCCAAGGCTGTGATGGATCAATATTGATAGCAGGGTTCTCCGCTGAAAGGAATGCATTGACAAACCTTGGTCTAAGAGGTTTCGAAGTGATAGACAATGCAAAATCACAAATAGAGGCCATATGCCCTGGAGTTGTCTCATGTGCTGACATCCTAGCATTAGCAGCTCGTGATGCTGTCGATTTGACCGATGGCCCAAGTTGGTCAGTACCAACAGGAAGAAGAGATGGAAGGATTTCTTTATCATCTCAAGCCTCAAACTTGCCTTCTCCACTTGAACCTGTTTCTGTCCACAGACAAAAATTTGCTGCCAAAGGTCTAGATGATCATGACCTTGTTACCTTACTCGGTGCACATACAATAGGCCAGACAGATTGCAGGTTCTTTAGTTATCGGATGTACAATTTCACACCAACTGGGAATGCCGATCCTTCTATAAACCAAGCTTTCTTATCCCAACTTCAAGTAATATGTCCGAAAAACGGCAATGGTTTGAGAAAGGTTGCTTTGGATAAAGATACTCCGGCCAAGTTTGATGCGAGTTTCTTCAAGAATGTACACGATGGTAATGGGGGTTCTAGAGTCAGACCAAAGGCTTCTATGATTAAGTTGAGTAGTGTTGATGTGAAGACTGGTTATGATGGAGAGATTAGAAAAGTGTGTTCAAAGTTTAATTGA 870 0.4218 MIVKLCFLVILVMTLTVKAQLKTGFYSTSCPTAESIVRSTVVSYFNNDPTIAPALLRLHFHDCFVQGCDGSILIAGFSAERNALTNLGLRGFEVIDNAKSQIEAICPGVVSCADILALAARDAVDLTDGPSWSVPTGRRDGRISLSSQASNLPSPLEPVSVHRQKFAAKGLDDHDLVTLLGAHTIGQTDCRFFSYRMYNFTPTGNADPSINQAFLSQLQVICPKNGNGLRKVALDKDTPAKFDASFFKNVHDGNGGSRVRPKASMIKLSSVDVKTGYDGEIRKVCSKFN 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03625 289 Pfam Peroxidase 37 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Vifa4g03625 289 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 FunFam Peroxidase 24 164 - -
Vifa4g03625 289 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vifa4g03625 289 PANTHER PEROXIDASE 25-RELATED 11 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 CDD secretory_peroxidase 20 288 IPR033905 GO:0004601|GO:0042744
Vifa4g03625 289 Gene3D - 25 152 - -
Vifa4g03625 289 SUPERFAMILY Heme-dependent peroxidases 20 289 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 Gene3D Peroxidase, domain 2 153 255 - -
Vifa4g03625 289 ProSiteProfiles Plant heme peroxidase family profile. 20 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa4g03625 289 FunFam Peroxidase 153 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03625 Vifa-Chr4 1146413657 1146414968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03625 4 289 Peroxidase AT2G41480 62.422 1.80e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03625 K00430 - gmx:100816487 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03625 4 1146413657 1146414968 Vifa4g03625 4 1146413657 1146414968 ECH