Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03608 ATGCAAGCTGTATATAAAATCTATTTCCAAGATGAAGGTGAAAAGTTTACATTTGAGGCTGCATGGAGATTATTGAAAGATGAACCTAAATGGCTCGCAGGTTCATCCGAAGCTTCTACAAAAAGAAGAAAGAATTCAGATTCAGGAGCATATTCTCCGCCTTCTAATCCATTAACACCAACAAGAAGTGAATACGATCCATCATCACCTACTTTGTCAGGTCGTCCAATCGGTCAAAAGGCAGCCAAAAGGAAGGAGAAAGAAAAGCTTGTGGAAATGCCTTCTACACCCAATGTCAAATATGGTTCTTTGAAAGATGACTTAAAAATGAAAATTGATCTGATGTCAATGTTTGAGCAGGACTATGCACGCATTGAGGGTGAAAAACTTGAGATAGAGAGAAAAAAAAAAGTTTGA 417 0.3765 MQAVYKIYFQDEGEKFTFEAAWRLLKDEPKWLAGSSEASTKRRKNSDSGAYSPPSNPLTPTRSEYDPSSPTLSGRPIGQKAAKRKEKEKLVEMPSTPNVKYGSLKDDLKMKIDLMSMFEQDYARIEGEKLEIERKKKV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03608 138 Pfam No apical meristem-associated C-terminal domain 15 135 IPR029466 -
Vifa4g03608 138 PANTHER - 1 120 - -
Vifa4g03608 138 MobiDBLite consensus disorder prediction 45 75 - -
Vifa4g03608 138 MobiDBLite consensus disorder prediction 33 98 - -
Vifa4g03608 138 MobiDBLite consensus disorder prediction 79 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03608 Vifa-Chr4 1142177465 1142177881 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03608 1 87 Glutathione S-transferase Gene Family AT5G41240 33.333 3.21e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03608 - - mtr:11446189 141.739