Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03571 ATGAATGAACTCTTGTCTTGGCTTAAACTCATCTCTTTTTCTTTCGTTTTTCTTCTCTTAGTTCTCAAACTAACAGTGTTACTCTGGTGGAGACCAAGAAAAATTGAAGGCTATTTCTCTAAACAAGGAATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAACGTTAAGGAACTTGTTGGTATGATGTTGAAAGCTTCCTCTCAACCCATGCCTAATCTCTCTCACAACATTCTCCCCAGAGTACTTTCTTTCTACCATCACTGGAAAAAAATTTACGGTGGAACGTTCCTAGTTTGGTTTGGACCCACTGTTCGTCTTACGGTCTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTCTATGAAAAAAATGAAGCTCCACCACTTGTGAAGCAGCTGGAAGGTGATGGACTTCTTAGCCTTAAAGGAGAAAAATGGGCTCAGCACCGTAGAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAATTGGTCGGAAATGAGTGATAAAGGTGAGGTGGAAATCGAAGTTTCTGAGTGTTTTCAAACCCTAACCGAAGATGTTATTACTAAGACCGCGTTTGGAAGTAGCTATCAAGATGGAAAAGCTATTTTCAGATTACAAGCTCAACAAATGGTCTTGGCTGCTGATGCCTTTCAAAAAGTTTTCATTCCCGGTTACAGATTCTTTCCAACAAGGAGGAATATAAAATCTTGGAAACTAGACAAGCAAATAAAGAAATCTTTGGTGAAGCTAATAGAAAGAAGGAGAGAGAATTCAAATGAGAGAATTGATGAAAAAGGGCCAAAAGATTTACTTGGATTAATGATTCAAGCCTCTAGCAAAACAAATGTGACAGTGGATGATATCGTGGGAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACTTGCTGACGTGGACGACCATACTCTTGGCAATGCACCCACAATGGCAGGTACAGGCACGTGACGAGGTCCTTAAGATGTGTGGGTCACGTGACATTCCAACTAAAGATCATGTTGTAAAGCTCAAGACGCTGAACATGATAGTTAACGAGTCACTACGACTATACCCACCTACGATCGCAACAATCCGACGGGCGAAAACAGACGTTGAATTAGGAGGCTACAAAATACCCCGTGGAACAGAGCTATTAATTCCAATCCTAGCCGTTCATCACGATCAAGCGATATGGGGCAACGACGTAAACGAATTCAATCCTGGCCGTTTCTCCGAAGGCGTGGCCCGCGCCGCGAAGCATCCGGTGGCGTTTATTCCATTTGGCCTTGGTGTGCGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAATTGGCACTAGTAATGATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTTCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAAACAATTGTCCACACCGGATAAAACCCCTCAAGGGTCCTCTTCATAG 1575 0.4279 MNELLSWLKLISFSFVFLLLVLKLTVLLWWRPRKIEGYFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPNLSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAQHRRIISPTFHMENLKLLIPVMATSVVEMLENWSEMSDKGEVEIEVSECFQTLTEDVITKTAFGSSYQDGKAIFRLQAQQMVLAADAFQKVFIPGYRFFPTRRNIKSWKLDKQIKKSLVKLIERRRENSNERIDEKGPKDLLGLMIQASSKTNVTVDDIVGECKSFFFAGKQTTSNLLTWTTILLAMHPQWQVQARDEVLKMCGSRDIPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALVMILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFKQLSTPDKTPQGSSS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03571 524 FunFam Cytochrome P450 734A1 29 513 - -
Vifa4g03571 524 CDD CYP734 83 506 - -
Vifa4g03571 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vifa4g03571 524 Pfam Cytochrome P450 83 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 505 - -
Vifa4g03571 524 Gene3D Cytochrome P450 29 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 SUPERFAMILY Cytochrome P450 38 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03571 524 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03571 Vifa-Chr4 1125423745 1125427111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03571 6 514 Cytochrome P450 AT2G26710 77.132 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03571 K15639 - gmx:100780027 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03571 4 1125423745 1125427111 Vifa4g03571 4 1125423745 1125427111 ECH