Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03508 ATGGCTTCCATGTTCAAAGTCTCAAACTCACTTTTCTTTTGCTTGATTCTTTTTGTTGCCTCACAATGTTTGGTTATCAATTGTACTGAATTTGAAGTTGGAGGTAGAAATGGTTGGGTTGTCCCTACCTCAAAGGACTCCGATGAAATGTATAACCAATGGGCTTCCCAAAATCGATTCAAAATCGACGACACTATTCATTTCAAGTATGATAAAGACTCAGTGATGATGGTGAGTGAAGAAGAATATGAAAAGTGCAAATCGGATCGTCCACTCTTTTTCGAAAACAATGGAAATACGGTTTACAAATTTGAACGACCGGGAATGTTCTATTTCATTAGTGGTGTTAGTGGTCATTGTACAAGAGGACAGAAAATGGTGATCAAAGTTTTAGATATTGAACCGATTACAGCACCGTCGCCACAATCTGCAAATGAGAATGCATCAATAGTACACTCTAAAGCTGCTTCTCAAATGGCTCCAATTAGTTTCATAGTATTCACAATCTTTGTTCTTTCATTCATTAGTATGGTTTGTGTTTGA 543 0.3702 MASMFKVSNSLFFCLILFVASQCLVINCTEFEVGGRNGWVVPTSKDSDEMYNQWASQNRFKIDDTIHFKYDKDSVMMVSEEEYEKCKSDRPLFFENNGNTVYKFERPGMFYFISGVSGHCTRGQKMVIKVLDIEPITAPSPQSANENASIVHSKAASQMAPISFIVFTIFVLSFISMVCV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03508 180 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
Vifa4g03508 180 PANTHER BLUE COPPER PROTEIN 29 148 IPR039391 GO:0009055
Vifa4g03508 180 FunFam Early nodulin-like protein 1 28 134 - -
Vifa4g03508 180 CDD OsENODL1_like 29 131 IPR041846 -
Vifa4g03508 180 Gene3D - 28 134 IPR008972 -
Vifa4g03508 180 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Vifa4g03508 180 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03508 Vifa-Chr4 1099309917 1099310588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03508 10 172 Phytocyanin Superfamily AT1G48940 44.186 7.52e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03508 - - gmx:102667643 228.794