Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03507 ATGGCTTCCATGTTCAAAGTCTTAAACTCACTTTTCCTTTGCTTGATTCTTTTTGCTGCCTCACAATGTTTGGTTATCAATTGTGCTGAATTTGAAGTTGGAGGTAGAAATGGTTGGGTTGTCCCTACCTCAAAGGACTCCGATGAAATGTATAACCAATGGGCTTCTCAAAATCGATTCAAAATCGAAGACACTATTCATTTCAAGTACGATAAAGACTCAGTGATGATGGTGAGTGAAGAAGAATACGAAAAGTGCAAATCGGATCGTCCACTCTTTTTCGAAAACAATGGAAACACAGTTTACAAATTTGAACGACCGGGAATGTTCTACTTCATTAGTGGTGTTAGTGGTCATTGTACAAGAGGACAGAAAATGGTGATCAAAGTTTTAGATATTGAACCAATTACAGCACCATCGCCACAATCTGCAAATGAGAATGCATCAATAGTACACTCTAAAGCTGCTTCTCAAACGGCTCCTATTAGTTTCATAGTATTCACGATCTTTGTTCTTTCATTCATTGGCATGGCTTGTGATTAA 543 0.3794 MASMFKVLNSLFLCLILFAASQCLVINCAEFEVGGRNGWVVPTSKDSDEMYNQWASQNRFKIEDTIHFKYDKDSVMMVSEEEYEKCKSDRPLFFENNGNTVYKFERPGMFYFISGVSGHCTRGQKMVIKVLDIEPITAPSPQSANENASIVHSKAASQTAPISFIVFTIFVLSFIGMACD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03507 180 FunFam Early nodulin-like protein 1 28 134 - -
Vifa4g03507 180 Gene3D - 28 134 IPR008972 -
Vifa4g03507 180 CDD OsENODL1_like 29 131 IPR041846 -
Vifa4g03507 180 PANTHER BLUE COPPER PROTEIN 29 149 IPR039391 GO:0009055
Vifa4g03507 180 SUPERFAMILY Cupredoxins 29 131 IPR008972 -
Vifa4g03507 180 ProSiteProfiles Phytocyanin domain profile. 29 132 IPR003245 GO:0009055
Vifa4g03507 180 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03507 Vifa-Chr4 1099294991 1099295662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03507 7 134 Phytocyanin Superfamily AT1G48940 53.906 1.34e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03507 - - gmx:102667643 225.713