Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03445 ATGATAGAAAACTCAACTGGTAAAGGTTATTACAGTGAAACAAGAAAGGAAGAGGATGAAAGTGGAGCAATGAACATAGAGAAATTCTCCAACAAAGCAATAGCAACATCATCAAGACAATGGACATCGTCAAGAAATCCAAGAATCGTGAGAGTGTCGCGTTCTTTAGGGGGAAAAGACAGACACAGCAAAGTGTGTACAATAAAAGGATTAAGAGACCGTCGTATTAGGTTGTCCGTACCAACGGCAATTCAGTTATATGATCTTCAAGACAGGCTTGGTTTAAGTCAACCTAGTAAAGTTGTTGATTGGTTACTTGAAGCAACTCAATCTGATATTGATAAGTTACCACCACTTGATTTTAGTACTCAACAACAAACCCTAAGGTATAATTTGCAGAATCCTCAACAATCCAATTTTTCTCTTGGAACTGCTTTTTATGATCATCATGAAATCAAAGGTAAACAACCTGAAAGTTCTGCAGAAAAGGGTAACTATTATTGTTCTAATTATTCATCAACTGGTTTTCCTTTTCCATATAATAATAACATGGATCTTTCAAGTACTCTATCATTATCACAATTTGGAGGCCATCATGCTAATTTATTTCATCAAAACAGTAATGGAAGTTCTATGCAATTTTCATCTTCTTCTAATTTGACAGTACCTAATTCACAGTTACTTTTTTGCCCTCCTTCTGTTATGCCATCATCACTTTTTAGTACCACTCAGATTGCTCCATCAATGGAAACTGATTTTCAAAGACAATTCAACCATGTTCAGATCTTGAATTCCTCATCGACTACTACTTTCATCCCGTCTCTTCATCTTCCAATCAATTCGCCTTTTAGACGCAATCAAACAATGCCGTTCATAAATTCCAAGCTTCTTGATTCAGATCATAATAACACCAGAAATGGATAG 924 0.3561 MIENSTGKGYYSETRKEEDESGAMNIEKFSNKAIATSSRQWTSSRNPRIVRVSRSLGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLEATQSDIDKLPPLDFSTQQQTLRYNLQNPQQSNFSLGTAFYDHHEIKGKQPESSAEKGNYYCSNYSSTGFPFPYNNNMDLSSTLSLSQFGGHHANLFHQNSNGSSMQFSSSSNLTVPNSQLLFCPPSVMPSSLFSTTQIAPSMETDFQRQFNHVQILNSSSTTTFIPSLHLPINSPFRRNQTMPFINSKLLDSDHNNTRNG 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03445 307 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 26 218 IPR005333 GO:0003700
Vifa4g03445 307 MobiDBLite consensus disorder prediction 1 25 - -
Vifa4g03445 307 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Vifa4g03445 307 Pfam TCP family transcription factor 58 153 IPR017887 -
Vifa4g03445 307 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03445 Vifa-Chr4 1077814036 1077814959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03445 41 121 TCP Transcription Factor Family AT5G60970 85.366 1.19e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vifa4g03445 TCP 3.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03445 - - psat:127073713 553.132