Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03423 ATGTCTCCATGGATCATTGTCTTTATCACAATTGCTGCATCGATTCTCATTTACAAACTTCTAAACCACATATCAAAGCCTTCCTCACCTCTTCCACCTGGGCCTACACCATGGCCGATCGTCGGAAACTTACCTCACATGGGCCCAGTTCCTCACCACGCCCTTGCAGCCTTAGCTCTTAAACACGGCCCTCTCATGCACCTCCGTTTAGGTTTCGTCGACGTTGTAGTCGCCGCCTCCGCCTCCGTGGCGGAGCAGTTCTTAAAAGTTCACGATGCTAATTTCTCTAGCCGGCCACCTAACTCCGGCGCTAAATACATAGCGTATAATTATCAAGATCTCGTGTTTGCTCCCTATGGACCACGGTGGCGGTTATTGAGGAAACTTTCTTACGTTCACATGTTTTCTTCCAGGGCTTTGGATAATTTTAGTCACATACGTCAGGAAGAGGTAGCAAGATTAATCCGCAATTTGTCAAGTTCAGGATCCAAAGCAGCAAACTTAGGACAAATGCTAAATGTATGCACAACCAACGCATTGGCAAGAGTAATGATAGGACGACGAGTATTCAACGATGGCAATAGTGGTTGTGATCCTAGAGCTGATGAATTTAAGTCTATGGTTGTTGAGCTTATGGCATTGGCTGGAGTTTTCAACGTTGGGGATTTTGTTCCTGCTTTAGAATGGTTGGATCTTCAAGGTGTGCAAGCCAAGATGAAGAAATTACACAAAAGGTTTGATGCATTTTTAACTAGCATTATTGGAGATCACAAGGTTTCCAAGAGTGAGAAGCATAATGACTTGTTGAGTACGTTACTGTCACTAAAAGAAAAAGTTGATGAAGATGGAGACAAACTCAATGACACCGAGATTAAAGCTTTACTTTTGAACATGTTCACCGCTGGAACAGACACATCATCTAGCACAACGGAGTGGGCTATTGCTGAACTGATAAGAAACCCTAGACTCATGGTTTCCATTCAGAAAGAGTTGGAAACTGTTGTTGGACGAGACAGGTTGGTTACTGAAATGGACTTGGCTAATCTTCCTTACTTAGAGGCTGTGGTTAAGGAAACGTTTCGACTTCATCCATCGACACCTCTTTCGCTTCCACGCGTCGCAACTGAGAGTTGTGAAATCTTCAACTATCATATCCCTAAAGGTGCAACACTTTTGGTTAATGTATGGGCCATATCACGTGACCCTAAGGAATGGTCCAACCCATTGGAGTTCAAGCCAGAAAGGTTTCTTCCTGGTGGTGAGAAGTTTGATGTTGATATTAAGGGAACTGATTTTGAGGTGATACCTTTTGGTGCTGGACGTAGAATATGTGCTGGTATGAGTCTTGGACTTAGGATGGTTCAACTTCTCACTGCTACATTAGTTCATGCATTTGATTGGGATTTAGAGGATGGGTTATTGCCTGAAAAACTCAACATGGATGAAGCATATGGGCTTACTTTACAAAGAGAAAAGCCTCTTTTGGTCCATCCTCGTCCAAGGCTTGCGCAGCATTTGTACCTATAG 1527 0.4361 MSPWIIVFITIAASILIYKLLNHISKPSSPLPPGPTPWPIVGNLPHMGPVPHHALAALALKHGPLMHLRLGFVDVVVAASASVAEQFLKVHDANFSSRPPNSGAKYIAYNYQDLVFAPYGPRWRLLRKLSYVHMFSSRALDNFSHIRQEEVARLIRNLSSSGSKAANLGQMLNVCTTNALARVMIGRRVFNDGNSGCDPRADEFKSMVVELMALAGVFNVGDFVPALEWLDLQGVQAKMKKLHKRFDAFLTSIIGDHKVSKSEKHNDLLSTLLSLKEKVDEDGDKLNDTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRLMVSIQKELETVVGRDRLVTEMDLANLPYLEAVVKETFRLHPSTPLSLPRVATESCEIFNYHIPKGATLLVNVWAISRDPKEWSNPLEFKPERFLPGGEKFDVDIKGTDFEVIPFGAGRRICAGMSLGLRMVQLLTATLVHAFDWDLEDGLLPEKLNMDEAYGLTLQREKPLLVHPRPRLAQHLYL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03423 508 Gene3D Cytochrome P450 24 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03423 508 PANTHER CYTOCHROME P450 98A9 9 507 - -
Vifa4g03423 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vifa4g03423 508 FunFam Red aleurone1 23 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03423 Vifa-Chr4 1068668598 1068672486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03423 7 507 Cytochrome P450 AT5G07990 67.126 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03423 K05280 - gmx:547475 789.645