Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g03422 | ATGGCAATAAAGTCTAACTGTAACATTAAATTAGAATATGATATGGTTCAGACAAAGCAAGATTGCTTATGTGTTTTGGTTTCTTTCAACCAAAGTTCTTGCTGGAAGAAGAAGCTTCCACTATCTTATGGAAGAAATGATCAAGTAGTAAAAGGAATTTTTGTCATGAAATTGATGAAAAACGATCCTTTTTCTTCCATTTCAAATCAAAAGAAAGATCATGAAACTTTGATTATTGTAATTTCGGTTCTTTTAGGAAGCTCTATGCTTGTCATTGTGACATTACTTGGAGCAATGTTTTTTGGGTTTCCTTACAACCTCAAGAAGATAAAAAGTTGTAGAACCAACAAAAATGTTGTTGACAATAACTTGCGCAATTTTAGCTTCAAGGAAATCGTTGAAGCAACGAGTAACTTCAGAGAGGAACTTGGAAGAGGGTCTTGTAGCGTTGTGTACAAAGGAACAATAGATATGATGGTTGATGTAGCCGTTAAGAAACTTGATAAGTTGCTTCAAGATAGTGATAAGGAATTTCAGACCGAAATGAGTGTGATAGGACAAACTCATCACAGAAACCTTGTTCGTCTTCTTGGATATTGCAATGAGGAACAACATCGGATTTTGGTTTACGAGTTAATGAGCAACGGAACTTTAGCAAGCTTCCTTTTCACCTCTTTAAAACCAAATTGGAACCAACGATTCCAAATTGTTCTTGGAATTGCTAGAGGTCTTGTATACTTGCATGAAGGATGTTGCACCCAAATCATCCATTGTGATATTAAACCCCAAAATATACTTCTAGATGATCACTACAATGCTAGGATTTCAGATTTTGGGTTAGCAAAGCTATTGCTGATTAATCAGAGCCACACCGAAACTGGAATTAGAGGAACCAAAGGGAAAAATGTAGAGAAGGAATTTGTTAATGAAGAACAAGGGATTTTAACTGATTGGGCTTATGATTGCTATAAGACTAAAATACTTGACAATCTCTTAGAAAATGATAATGAGGTCGGAAATGACATGATGAGTTTGGAAAAGTTAGTCATGATTGTTATTTGGTGTATTCAAGAAGATCCTTCTCTTAGGCCAACAATGAAGGAGGTTTTACTGATGTTAGAAGGAATAGTCGAAGTTGTTGTTCCCCGAAGTCCCTATCTTTATGGTTCTGTAAGTTGTAATTAA | 1185 | 0.3527 | MAIKSNCNIKLEYDMVQTKQDCLCVLVSFNQSSCWKKKLPLSYGRNDQVVKGIFVMKLMKNDPFSSISNQKKDHETLIIVISVLLGSSMLVIVTLLGAMFFGFPYNLKKIKSCRTNKNVVDNNLRNFSFKEIVEATSNFREELGRGSCSVVYKGTIDMMVDVAVKKLDKLLQDSDKEFQTEMSVIGQTHHRNLVRLLGYCNEEQHRILVYELMSNGTLASFLFTSLKPNWNQRFQIVLGIARGLVYLHEGCCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLLINQSHTETGIRGTKGKNVEKEFVNEEQGILTDWAYDCYKTKILDNLLENDNEVGNDMMSLEKLVMIVIWCIQEDPSLRPTMKEVLLMLEGIVEVVVPRSPYLYGSVSCN | 394 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g03422 | 394 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 301 | 382 | - | - | |
Vifa4g03422 | 394 | Gene3D | Transferase(Phosphotransferase) domain 1 | 301 | 383 | - | - | |
Vifa4g03422 | 394 | SUPERFAMILY | Protein kinase-like (PK-like) | 129 | 382 | IPR011009 | - | |
Vifa4g03422 | 394 | Gene3D | Transferase(Phosphotransferase) domain 1 | 213 | 300 | - | - | |
Vifa4g03422 | 394 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 255 | 267 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa4g03422 | 394 | FunFam | Os07g0541700 protein | 213 | 298 | - | - | |
Vifa4g03422 | 394 | SMART | serkin_6 | 137 | 373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03422 | 394 | Gene3D | Phosphorylase Kinase; domain 1 | 104 | 212 | - | - | |
Vifa4g03422 | 394 | ProSiteProfiles | Protein kinase domain profile. | 137 | 387 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03422 | 394 | Pfam | Protein kinase domain | 140 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa4g03422 | 394 | FunFam | S-receptor-like serine/threonine-protein kinase | 107 | 212 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g03422 | Vifa-Chr4 | 1068294843 | 1068296106 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g03422 | 69 | 378 | Receptor kinase-like Gene Family | AT5G45780 | 34.758 | 6.17e-57 | 194 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vifa4g03422 | Pkinase | 5.1e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g03422 | - | - | mtr:25487002 | 640.958 |