Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa4g03397 | ATGGCGCTGTTCAGAAGGTTCTTTTACCGGAAGCCGCCGGATCGCCTTTTGGAGATCTCTGAGAGGGTTTATGTTTTTGATTGTTGTTTCTCCACGGACGTATTGGAAGAAGGTGAGTACAAAGTTTATATGGGGGGAGTTGTGGCTCAGCTACAAGATCACTTTCCGGAAGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGAGAGGCGAACCCAAGTCTCAGACATACTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCTCTTCTGCCTTTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTGTGGAAGGGCAACAGAATGTGCTTTTGATGCATTGTGAGAGGGGAGGATGGCCTGTGCTGGCATTCATGCTAGCAGGTCTTCTGTTGTACCGGAAACAGTACAGCGGGGAGCAAAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAACTGCTCCACCTTTTAACTCCGTTGAACCCACAACCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGAAGACATCTGGGTTCTGAGTGGCCGCCGTCAGACACACCCTTGTACCTGGATTGTCTGATTCTTAGAGACCTCCCTTTATTCGATGATGGAAAAGGTTGCAGACCTGTTGTGCGTGTTTATGGTCCGGACCCTTCAAAACCTGCCAATAGAAGTTCGAAGCTTCTTTTCTCAACCTCAAACTCCCTAAAGCATGTTCGACACTATCAACAGGCAGAGTGTATGCTTGTGAAAATTGATCTCCGTTGTCGTGTTCAAGGAGATGTGGTTCTTGAGTGCATAAATTTAAACGAAGATTCTACTGGTGAGGAGGTGATGTTTAGAATTATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGCTGAGCCGTGATGAAATTGATATTTTGTGGGATGCTAAGGATCAATACCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTGAACACAGTAACGGCGGCGAGTCAAGATGCAAATGAAACAGAAAATGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGTGGTTGATGTGCAGGAAAGTAAGGCAGAGGATAATTCTCAAACTTTTCATGACAATGCAGTGAATGATGGAAATCATAAAAGGATCTGGAGGGAGGATTCAGGTCCTCACGCTTTTCAGGATTGCACGCCAGATGATGGGATTCACACACAGGTTGGAAAGATGGATTCCGGTATTAATGATGTGAAAGATATCTCTGTTGATGATGTTAACTGCAAGTTCAATGCGAGCACGGATTCGGATCCTCAGGCAGTGAAGGACATTGCCATGGATGATGGAGAAATTAAGTCAAATTCCACTGCCATAAATTATGATATGATGATACCTTTGGAAACAAAGGAAATCATTGAGGATGCTGATCGGGGATCAGCAATTATGCAGGACAAATATGATGAAGATAACGAGGCAACAGAGAAGGAATTAGATTACAAGGAAGGGCAGCCCATGCCTGATAGTTCCAAACAAAAATCTGGTAAACTACCTCCATCTACTGCTAAGAAACAAATTCCATCAAACTCAAAGCCAGGAGATACTGTTGGAAAACAAAAGGTTAAAGAAACCACTGCTTTTCAGGCAAAACAAGCTAAACCAACTGCAGTGACGAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCAATGCATGTGTATTATCCACCAACAAGGATTAATAGTGCACCACCTGGACTGTCAAATATAACCACTTCAAAGGAGAAAATGGACGATAACAAAACAAGATCCTTAGCTGCTCCTTTTGGCTCTGCAGCAGCTGTTTCTGCTGACATGAAAAATGACCTGAAAAGTCGGAAGGTGACCACTTCAAAATCTTTCGGCCAAGTAGTATCAGAAATTGATGCAAAATGTCCATTATCGCCGCCATCAGTTAAAGAGACATCTCTTAAGTCAGTAAGTCAAGTACAAGAGCAGAGCTCAGAGCAATTGCTACAACCTCTTGCACTGCGTCCTATTCCTCCTCCTCCTCCACCACCTTTGCCACCATCCTTTTCATCATTTAGTAGACAAGACATTAGGGTGAATTTACAACCTGCAACTTCTCCCCCACCTCCACCTCCGCCACCACCTCAACCCTCATGGAAGTCTGTGGCTTCATCGATAGTTGGAGAGACTCGTGGTTCTTTCCCACTCTCTCCACTCGCCCTTCCCTTTGCAAGCAATGGAATTACATCAAAATTTTCTGAAGTACCTACTGAAGTGGCTCCATCAAGGCCTCCTCCACCACCACCACCACCACCACCACCACCAATCCTCCCTCCATGGCACGAAGTTTCAACCGTTCCTCTACTACCATCAACAGTACCTCCTGCAAAGCATGGAGTTTCATCAATTCCTCCTCCTCCTCCTCCCCCCTCATTTCCTATGTCTTCAACAAACATGTCTCCAATCCCGCCACCTACAACTACATCTCAAAAAGCTCCACCCCCACCTCCACCTCCACCTCATCCACCCTTTGTTAATTCATATACAAGTTCACCTGCACCACCTCTATCTCCAACTCCTTTTCGTAAGGCTCCATCACCTCCGCCTCCACCTCCTTTTACTAATGCTCCAACAGAAATGCCTCCACCACCACCTCCACCACCACCTTTTACTAGGACTCCACCAGCACCACCCCCACCTCCTCCACTCCCTTTTAGTACATCTCGGTCTGCACCCTCTCTTTTTACTAGAGCTCCACCACCCCCACCCCCACCTCTTCATTTATTGGGTGGATCCCCACCTCCACCTCCACCTCCACCTCCTCCAGTGTCTAGAGCCCCTCCCCCTCCACCTCCTCCATTGTATGGAGCCCCTCCTCCTCCTCCTTCTCCTCCATTGTATGGAGCCCCTCCTCCTCCACCTCCTTCGATGTCTAGAGCCCCTCCACCTCCTCCGACGCATGGAGCACCACCACCACCACCACTTCCCGGTGGTCGAGGACCACCACCACCACCACCACCTCCCGGTGGCCGAGGCCCGCCACCACCACCACCACCTCCTGGTGGCCGAGGAGGCCCACCTCCACCCCCTCCTCCTGGTGGTCGAGGAGGCCCACCTCCTCCACCTCTTCCTGGTGGTCGAGGCCCGCCTCCACCTCCTCCTCCTGGTGGTCGAGGAGGCCCGCCTCCACCTCCTCCTCCTGGTGGTCGAGGAGGCCCACCTCCTCCACCTTTTCCTGGTGGTGCACCTCCACCACCTCCGCCCTTGGGTTCTAAAGGTGCAAATGTTGGAGCTGACCCAAATGGGAGAGGGCGTGGATATGCCCGCCCTGCTGCAGTGGCACCCCGGCGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAGGAATTACAAAGACATGGAGAACTGCAAATTGCACCAGAGTTTGATGTTTCGGAGCTAGAGAAACTTTTCTCTACAAATGTTCCAAAACCCACCGATTCAAAATCTGGAGGGAGGCGCAAGTCTACTGGATCTAAACCCGATAAAGTTCAATTGGTTGACCTAAGGAGGGCTAATAATACGGAAATCATGCTTACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCAGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAAATGGAACTTTTGAAGGCATACACCGGCAACAAGGAGAATTTGGGAAAGTGTGAGCAGTTTTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAGTTAAGAGTTTTCGCTTTCAAAATTCAGTTTCAGGCTCAGGTTACCGAATTTAGGAAGAGTTTAAACACGGTAAACTCTGCCTGTGAAGAGGTCCGGAAATCTACCAAACTGAAGGATATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAGGGAACTGCCAGGGGATCTGCAGTTGGATTTAAGTTGGATAGTCTTTCAAAGCTCACCGACACTCGTGCTACTAACAATAAGATGACACTAATGCATTATCTCTGCAAGGTGCTAGCTGAAAGGTCTCCTGGACTCCTTGATTTTCACAAAGACCTTGTTAGTCTGGAAGGCGCCACTAAGATACAATTGAAATCATTAGCTGAAGAGATGCAGGCAATCACCAAGGGATTAGAGAAGGTTAAACAAGAGCTTGCTGGATCAGAAAATGATGGACCTGTGTCCGAAGTTTTCCGTAAGACATTGAAAGGATTCATTACTGTAGCTGAATCAGATGTGGCAGATCTGACAAAATTATATTCTACAGTGGGTAAAAATGCTGATGCACTTGCACTGTATTTCGGTGAGGAGCCTTCTCGATGCCCATGTGAGCAAGTTACTGCAACTCTATTAAATTTCATAAGGTTGTTCCGAAAAGCACATGAAGAGAATTGCAAACAAGCAGAACTAGAGAAAAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTAACAAAAAAGAGTGGAAAAGATAGTTGA | 4641 | 0.4678 | MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEGEYKVYMGGVVAQLQDHFPEASFMVFNFREGERRTQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSVEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLTPLNPQPSQFRYLQYISRRHLGSEWPPSDTPLYLDCLILRDLPLFDDGKGCRPVVRVYGPDPSKPANRSSKLLFSTSNSLKHVRHYQQAECMLVKIDLRCRVQGDVVLECINLNEDSTGEEVMFRIMFHTAFVRSNILMLSRDEIDILWDAKDQYPKDFKAEVLFLDADAVIPDLNTVTAASQDANETENASPEEFYEVEEIFSNVVDVQESKAEDNSQTFHDNAVNDGNHKRIWREDSGPHAFQDCTPDDGIHTQVGKMDSGINDVKDISVDDVNCKFNASTDSDPQAVKDIAMDDGEIKSNSTAINYDMMIPLETKEIIEDADRGSAIMQDKYDEDNEATEKELDYKEGQPMPDSSKQKSGKLPPSTAKKQIPSNSKPGDTVGKQKVKETTAFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPTRINSAPPGLSNITTSKEKMDDNKTRSLAAPFGSAAAVSADMKNDLKSRKVTTSKSFGQVVSEIDAKCPLSPPSVKETSLKSVSQVQEQSSEQLLQPLALRPIPPPPPPPLPPSFSSFSRQDIRVNLQPATSPPPPPPPPPQPSWKSVASSIVGETRGSFPLSPLALPFASNGITSKFSEVPTEVAPSRPPPPPPPPPPPPILPPWHEVSTVPLLPSTVPPAKHGVSSIPPPPPPPSFPMSSTNMSPIPPPTTTSQKAPPPPPPPPHPPFVNSYTSSPAPPLSPTPFRKAPSPPPPPPFTNAPTEMPPPPPPPPPFTRTPPAPPPPPPLPFSTSRSAPSLFTRAPPPPPPPLHLLGGSPPPPPPPPPPVSRAPPPPPPPLYGAPPPPPSPPLYGAPPPPPPSMSRAPPPPPTHGAPPPPPLPGGRGPPPPPPPPGGRGPPPPPPPPGGRGGPPPPPPPGGRGGPPPPPLPGGRGPPPPPPPGGRGGPPPPPPPGGRGGPPPPPFPGGAPPPPPPLGSKGANVGADPNGRGRGYARPAAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGELQIAPEFDVSELEKLFSTNVPKPTDSKSGGRRKSTGSKPDKVQLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMELLKAYTGNKENLGKCEQFFLELMKVPRVESKLRVFAFKIQFQAQVTEFRKSLNTVNSACEEVRKSTKLKDIMKKILFLGNTLNQGTARGSAVGFKLDSLSKLTDTRATNNKMTLMHYLCKVLAERSPGLLDFHKDLVSLEGATKIQLKSLAEEMQAITKGLEKVKQELAGSENDGPVSEVFRKTLKGFITVAESDVADLTKLYSTVGKNADALALYFGEEPSRCPCEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSGKDS | 1546 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa4g03397 | 1546 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
| Vifa4g03397 | 1546 | MobiDBLite | consensus disorder prediction | 938 | 1114 | - | - | |
| Vifa4g03397 | 1546 | MobiDBLite | consensus disorder prediction | 782 | 804 | - | - | |
| Vifa4g03397 | 1546 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 336 | IPR014020 | - | |
| Vifa4g03397 | 1546 | Pfam | Formin Homology 2 Domain | 1139 | 1506 | IPR015425 | - | |
| Vifa4g03397 | 1546 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 1133 | 1532 | IPR015425 | - | |
| Vifa4g03397 | 1546 | Coils | Coil | 1507 | 1541 | - | - | |
| Vifa4g03397 | 1546 | MobiDBLite | consensus disorder prediction | 726 | 742 | - | - | |
| Vifa4g03397 | 1546 | MobiDBLite | consensus disorder prediction | 526 | 613 | - | - | |
| Vifa4g03397 | 1546 | FunFam | Formin-like protein | 1132 | 1518 | - | - |
Showing 1 to 10 of 30 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa4g03397 | - | - | psat:127073762 | 1496.49 |
Showing 1 to 1 of 1 entries