Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03369 ATGGAAACTGGACGAAACGAAACACCCCTTTTGCTTTTTCGTTTTGTCTCTAAATTTTTATTATGCGCCATTTCTGGAACTCTCACAGCATGTTTTGCCGTTGCGGGGGCTTTAACAGGAGCTGTTGCTGGTGCTTTAGCAGCTAAGGCTACAAAGAGTGGTTTTCTTCGGGGAGTTTCATTGGGGGCCATTGCTGGGGCTATACTCTCGGTTGAGGTATTGGAAGCTTCCCGTGCGTACTGGTGTATGGAGCAAACTGGTTCACGAGGAACGTCATCTATGGCAGATTTCATAGAGGAACTTGTTCGTGGAAGGCTTGTAGAAGAATCGCTTACACCAGCTATTTTAACTGCTTACAATTTGCAAGTTGGAATTGCTAATAACACTGGTTATGATGAGATTCATGATCTTCAGAGCTTAGTAGCATCCAGAGGATTGTCAGGTGATTCATTGAGTAAGCTACCGCACCATATGATCATGAAGGACATGAAGGCAGAGGATACTTTGTGTGCAATATGTTTACAGGATATGGAAGTAGGTGAAGTTGCAAGAAGCTTACCTCATTGTTACCATACATTTCACTTGATATGTGTGGATAAATGGCTTGTGAAGAATGATTCATGTCCTATTTGCAGACAGAATGTGTAG 648 0.4275 METGRNETPLLLFRFVSKFLLCAISGTLTACFAVAGALTGAVAGALAAKATKSGFLRGVSLGAIAGAILSVEVLEASRAYWCMEQTGSRGTSSMADFIEELVRGRLVEESLTPAILTAYNLQVGIANNTGYDEIHDLQSLVASRGLSGDSLSKLPHHMIMKDMKAEDTLCAICLQDMEVGEVARSLPHCYHTFHLICVDKWLVKNDSCPICRQNV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03369 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 215 IPR013083 -
Vifa4g03369 215 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Vifa4g03369 215 ProSiteProfiles Zinc finger RING-type profile. 170 212 IPR001841 -
Vifa4g03369 215 SMART ring_2 170 211 IPR001841 -
Vifa4g03369 215 Pfam Ring finger domain 170 212 IPR001841 -
Vifa4g03369 215 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 16 214 IPR044523 -
Vifa4g03369 215 SUPERFAMILY RING/U-box 151 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03369 Vifa-Chr4 1053946519 1053948582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03369 16 215 C3H Transcription Factor Family AT1G74410 56.219 9.34e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03369 - - gmx:100800105 335.495