Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03359 ATGGAGACCAAGCCACTCATGTGTTGGAACTCTTATTACCATGACAAAGAGGAAAAAACCATTTCCATTTGCATTGGAAATAGCAGTGGACAGTACAATTTCCCAATGAATTTGCCAAAGGAAGAATTTCCAATGCACGATATCTATCTAGCTTTTGATGACCCTTTATACGAATCTCTCTCCATTGAACCAACACCAAACATGCAACTTCAAGACTTTGATTTTAATGATATGGAAGAAGGGTTTTTCGGGTGGAACGAAATGATCGATGAACTGTTTGATAGGGAAAAATTATTTGTAAGTTGCAGTGATATGATGAGTGGAAGTGAAGTGAAGAAAGAGGTTATGGAGTTTAATGCGGAAGTAGAAGAGAGAAGTTCAAAGAATTTGTCAAGGAAGATTATATCTCAGTATTTCTATATGCCAATAACACAGGCAGCGAGAGAACTCAATGTAGGTCTCACACATTTGAAGAAAAGGTGTAGGGAATTAGGTATTCGCAGGTGGCCTCACAGGAAACTCATGAGTCTTCAAACCTTGATAAATAATGTTCAGGAATTAGGGAAAGTGGAGGCGCCTGAGAATCAGGAGAAGATGAGGAGTTATATTGAGGTGTTGGAAAAGGAAAAGAAGTTGGTGGAGGAGATGCCTGATAAGCAATTGGAAGATCATACCAAAAGGCTTAGACAAGCATGGTTTTAA 702 0.3875 METKPLMCWNSYYHDKEEKTISICIGNSSGQYNFPMNLPKEEFPMHDIYLAFDDPLYESLSIEPTPNMQLQDFDFNDMEEGFFGWNEMIDELFDREKLFVSCSDMMSGSEVKKEVMEFNAEVEERSSKNLSRKIISQYFYMPITQAARELNVGLTHLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKVEAPENQEKMRSYIEVLEKEKKLVEEMPDKQLEDHTKRLRQAWF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03359 233 ProSiteProfiles RWP-RK domain profile. 112 198 IPR003035 -
Vifa4g03359 233 PANTHER PROTEIN RKD4 125 231 IPR044607 GO:0003700
Vifa4g03359 233 Pfam RWP-RK domain 129 177 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03359 Vifa-Chr4 1051167753 1051168745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03359 127 233 AtRKD Transcription Factor Family AT1G18790 71.028 1.11e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vifa4g03359 RWP-RK 3.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03359 - - gmx:100788666 229.18