Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03260 ATGGATATTCCGATCCCGACTCGTCAGTTATTCATTAACGGCGACTGGAAAGCTCCCGTCCATAACAAACGGATTCCCGTCATCAATCCCGCCACCCAAAACATCATCGGCGATATCCCAGCCGCTACTAAGGAAGATGTCGATACCGCCGTCGCCGCCGCGAAAACTGCTCTCAACCGTAACAAAGGCGCTGATTGGGCTACCGCTTCTGGCGCTGTTCGTGCTGGATATCTACGCGCTATCGCTGCTAAGGTTACAGAGAAAAAGCCTGAACTAGCGAAGCTTGAGGCTATTGATTGTGGAAAACCGCTCGATGAGGCCGCGTGGGACATTGACGATGTTGCTGGTTGCTTTGAGTTTTATGCTGATCTTGCTGAAAAGTTGGATGCGAGACAAAAGACGCCGGTGTCTCTTCCGATGGATACATTCAAGAGTCACGTGCTTAGGGAACCTATTGGTGTTGTTGGATTGATAACTCCATGGAATTATCCTATGTTGATGGCTACGTGGAAGGTTGCTCCTGCTCTTGCTGCAGGCTGTGCTGCGATATTGAAGCCGTCTGAATTGGCATCTTTAACCTGCTTGGAGTTGGGCGAAATATGCAAAGAAGTGGGTCTTCCTCCAGGTGTGTTGAATATTCTCACTGGATTAGGTCCTGAAGCTGGTGCTCCTTTGGCAACGCATCCTGATGTTGACAAGGTTGCTTTTACTGGAAGCTCTGCAACTGGAAGCAAAATTATGACAGCTGCAGCTCAGCTAGTCAAGCCTGTTTCACTGGAGCTTGGTGGAAAAGGCCCATTAGTTGTTTTTGAGGATGTTGACCTTGATAAGGCTGCTGAATGGGCCATCTTTGGCTGCTTCTGGACAAATGGTCAGATATGCAGTGCAACTTCCCGTCTGATCGTACATGAAAGTATAGCAACCGAATTTTTGAATAGGATTGTGAAATGGATCAAAAACATCAAAATTTCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGACCTGTTGTTAGCGAAGGACAGTATGAAAAAATATTGAAGTTTGTCTCGAATGCTAAGAGCGAGGGTGCAACCATTTTGACTGGTGGGTCTCGACCAGAGCATCTAAAGAAAGGATTCTTTATTGAACCAACCGTCATAACTGATGTGACTACTTCCATGCAAATTTGGAGAGAAGAAGTATTTGGACCCGTCCTCTGTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACTATCTATGGCTTAGGTGCTGCTGTAATATCAAATGATCTAGAAAGATGTGAGCGTGTTACTAAGGCTTTTAAGTCCGGAATCGTATGGGTCAATTGCTCTCAGCCATGCTTCACTCAAGCTCCTTGGGGAGGCATCAAACGGAGTGGTTTTGGCCGTGAACTAGGAGAATGGGGACTTGACAATTACTTGAGCGTGAAGCAAGTGACTCGGTATATCTCTGATGAACCATGGGGCTGGTATCTGCCTCCTGCAAAACTGTGA 1512 0.4656 MDIPIPTRQLFINGDWKAPVHNKRIPVINPATQNIIGDIPAATKEDVDTAVAAAKTALNRNKGADWATASGAVRAGYLRAIAAKVTEKKPELAKLEAIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDARQKTPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAAQLVKPVSLELGGKGPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLIVHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTVITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVISNDLERCERVTKAFKSGIVWVNCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRYISDEPWGWYLPPAKL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03260 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Vifa4g03260 503 PANTHER ALDEHYDE DEHYDROGENASE 5 502 - -
Vifa4g03260 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Vifa4g03260 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
Vifa4g03260 503 Pfam Aldehyde dehydrogenase family 20 485 IPR015590 GO:0016491
Vifa4g03260 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Vifa4g03260 503 SUPERFAMILY ALDH-like 4 486 IPR016161 GO:0016491
Vifa4g03260 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Vifa4g03260 503 CDD ALDH_F10_BADH 27 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03260 Vifa-Chr4 1022268281 1022272621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03260 1 500 Aldehyde Dehydrogenase Gene Family AT1G74920 79.800 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03260 K00130 - gmx:100170731 926.391