Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03204 ATGGAAGTTCCCAAACCCCCTTCCAAAGATAAACGATTCAGAACCAAACATAAATTGTTGTTTAAAATCGGTGCTGTCATTTTCATCCTTATTCTCTTGTTTCTGGGTTTTTATCTCGAGTCTTATAGCTGGAAACCCAATGCGTCGTCGTATTACACTGTTGTTATAGACTGTGGAAGCACAGGGACACGGGTTAATGTATATGAATGGATGTTAGGGAGTGTCGTAGGTAATAGAAATTTGCCGGTTTTGCTACATTCATATCCTGATAGTAATGCAACAAATGGAAATAGTTTGCTTTGGAAAACCTCTTGTCAATATCATTGTATGCAAACCCAACCCGGGTTAGATAAATTGGTTAATGATTCTTTAGGTGTGAGACAAGCTTTGACGCCTTTGATTGTTTGGGCGGAAAGTTTAGTTCCTCGAGAAATGCACGGCGATACACCGATTTTTGTTCTGGCTACTGCTGGACTGAGGAGGCTTCAGAGGGAGGATGCATTTTGGGTTTTGGAGGATGTTGAGGCTGTTGTGAAAGATCACTCTTTTATGTTTGATAAGAGCTGGATTAGGGTTTTGAGTGGGAGGGAGGAAGCTTATTATGGTTGGGTGGCTTTGAATTACAAAATGAGTAGCTTTGATGATGGGTCTACTTTGGGACTTGTTGATTTGGGTGGCTCGTCGTTGCAGATTGTGGTGGAGATTGATCGCGCTACTGGGGATGATGTGAACACGATGAGATCGGAGTTTGGATCAGTTGAACATAGGATTGTGGCGTATTCGTTGCCTGCATTTGGGTTAAATGAAGCCTTTGATAGGACTGTTGTTATGCTTAGAAATAATCAGAGTGTAGAAAGAACCAGAGGTATTTCTGAACTCAGACATCCTTGTCTGATGTCTACTTTTGGACAAAATTATACCTGCTCTTATTGCTCGGGACTTGATGCCGCTGACCAAAACAATCATAGCCAACCACAAAACACTTTAAGTCTTACTGGAGAACCTGATTGGGAACAATGTAGAGAAATAGCTATTGCTGCTGCTATGAACTTGAGCGATTCCCAAGTGTCACATCAAGCAGTTGGTTCAAATTGCCAAGCAAGTTTGTTTTCTGGTATTGGCACTGATGCACTTAACTTAACAGCTGTTGCTCACCCAATGAAGCGATTTCATGCATTATCTGGTTTCTTTTTTGTCTACAATAAGCTAAATTTGAGCCCAAGAGCCAATTTAACAATGATTTGGGAGTCAGTTTTGTTTCCAGGTGATGTTTCCTGGACATTAGGAGCTGCATTGGTTGAAGGGAAATTTCAATGGTTAAATATTGCAAGCCACAAATCCCAAACTATAATTTCTTCTTTGAAGAATGTGAACGTCATGACTTCTTCAACTTGTCTTTTCGCTGTCCTTTTGTTGCTTTTATTGATTGTTTATTGTACTCAAATTAAGCTACCTATGCCAAGCAGAAGGGCTTCGCACTAA 1482 0.4055 MEVPKPPSKDKRFRTKHKLLFKIGAVIFILILLFLGFYLESYSWKPNASSYYTVVIDCGSTGTRVNVYEWMLGSVVGNRNLPVLLHSYPDSNATNGNSLLWKTSCQYHCMQTQPGLDKLVNDSLGVRQALTPLIVWAESLVPREMHGDTPIFVLATAGLRRLQREDAFWVLEDVEAVVKDHSFMFDKSWIRVLSGREEAYYGWVALNYKMSSFDDGSTLGLVDLGGSSLQIVVEIDRATGDDVNTMRSEFGSVEHRIVAYSLPAFGLNEAFDRTVVMLRNNQSVERTRGISELRHPCLMSTFGQNYTCSYCSGLDAADQNNHSQPQNTLSLTGEPDWEQCREIAIAAAMNLSDSQVSHQAVGSNCQASLFSGIGTDALNLTAVAHPMKRFHALSGFFFVYNKLNLSPRANLTMIWESVLFPGDVSWTLGAALVEGKFQWLNIASHKSQTIISSLKNVNVMTSSTCLFAVLLLLLLIVYCTQIKLPMPSRRASH 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03204 493 Gene3D Exopolyphosphatase. Domain 2 195 419 - -
Vifa4g03204 493 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 24 405 IPR000407 GO:0016787
Vifa4g03204 493 Gene3D - 41 194 - -
Vifa4g03204 493 Pfam GDA1/CD39 (nucleoside phosphatase) family 48 351 IPR000407 GO:0016787
Vifa4g03204 493 ProSitePatterns Lysosome-associated membrane glycoproteins duplicated domain signature. 464 478 IPR018134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03204 Vifa-Chr4 1012110340 1012112851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03204 15 433 Nodulin-like Gene Family AT4G19180 34.803 2.22e-75 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03204 - - gmx:100775757 650.588