Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03184 ATGACTCTTTACTCCAAATTAAAGCTATCCATGGAATCAAATCCCAAAAATACAACCAAGTTTCTCTTTAGCTACGGCGGTAAAATCCTTCCCCGCCATACCGACGGCAAGCTCCGCTACACCGGCGGCCACACCAGAGTCCTCGCGCTCCCTCTTCCCATTTCTTTCTCAGAGTTGATGGTGAAGTTTGTGGAATTATGCGGTTCATCTGTTACACTCAAGTGTTGTTTACCAAACGGAGATTTAGAGACATTGATTTCAATCACCAGCCACGAAGATCTGAAAAATATAATCGAAGAATATGATCGAGTTTCTTCGTCGTTACCTCATCCGTTGAAAATCAGAGCTATTCTTTCACCTCCCAAATCCCTCAAGAAAGTATCTCCTCCCCAATCTTCTTCGTCTAGCGTAACATACTCTCCCTCTGGTTCAATTTACGGGTCCTTGGAATCACTGAATCGGCCGAATTGCTCGCCGGTTTCTCTAAGGTTTCCGATTGGTATTCGGAATGGGGCGGTGAAAGGTGGCTGTTACACGGGGCAGTTACATGGAAGCCCTAGATTCGTATATTGGTTCAGTAATAATTATTGTCAATGA 597 0.4456 MTLYSKLKLSMESNPKNTTKFLFSYGGKILPRHTDGKLRYTGGHTRVLALPLPISFSELMVKFVELCGSSVTLKCCLPNGDLETLISITSHEDLKNIIEEYDRVSSSLPHPLKIRAILSPPKSLKKVSPPQSSSSSVTYSPSGSIYGSLESLNRPNCSPVSLRFPIGIRNGAVKGGCYTGQLHGSPRFVYWFSNNYCQ 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03184 198 SMART PB1_new 33 119 IPR000270 GO:0005515
Vifa4g03184 198 Gene3D - 37 118 - -
Vifa4g03184 198 PANTHER OS05G0427100 PROTEIN-RELATED 11 135 - -
Vifa4g03184 198 SUPERFAMILY CAD & PB1 domains 35 127 - -
Vifa4g03184 198 Pfam PB1 domain 35 106 IPR000270 GO:0005515
Vifa4g03184 198 CDD PB1_UP2 24 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03184 Vifa-Chr4 1006674038 1006674727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03184 17 100 MAP Kinase Kinase Kinase AT2G35050 50.000 9.69e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03184 - - mtr:25493721 229.18