Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03170 ATGTTTGTTGGAGGAACTGACACAACATCAGCAACATTAGAATGGACAATGTCAGAGCTATTGAGACATCCATCCATAATGAAGAAAGCGCAAGAAGAAGTAAGAAGAATTGTAAGCAATAAATCCAAAGTTGAAGAAAGCGACATAAATCAAATGCACTATTTAAAATGTGTAGTGAAAGAAATTTTAAGGTTACATCCAGCTACTCCTCTAATGGCTCCTCGAGAAACAATATCAAGTGTGAATCTAAAAGGGTATGACATTCCTGAAAAAACAATGGTGTATGTAAACAATTGGGCAATACAAAGAGACCCTAAAAATTGGGAAAATCCTGAAGAGTTCATTCCAGAGAGATTTGAACATAGCCAAGTTGATTTTAGAGGTCAAGATTTTCAGTTCATTTCTTTTGGTTTTGGGAGAAGGGGATGTCCTGGAATGAATTATGGAATAACTGTTGTTGAATATATACTTGCTAACGTTCTTTATTGGTTTGATTGGGAAACAAATTTGGGTAAACAAGATATAAATATGAGCGAAGTGTTTGGACTTGTTGTATCAATGAAAGAACCACTTCACCTTAAACCAATAACATTTTCATTTTAA 603 0.3416 MFVGGTDTTSATLEWTMSELLRHPSIMKKAQEEVRRIVSNKSKVEESDINQMHYLKCVVKEILRLHPATPLMAPRETISSVNLKGYDIPEKTMVYVNNWAIQRDPKNWENPEEFIPERFEHSQVDFRGQDFQFISFGFGRRGCPGMNYGITVVEYILANVLYWFDWETNLGKQDINMSEVFGLVVSMKEPLHLKPITFSF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03170 200 Gene3D Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 136 145 IPR017972 GO:0005506|GO:0016705
Vifa4g03170 200 PANTHER CYTOCHROME P450 71B11-RELATED 1 196 - -
Vifa4g03170 200 FunFam Predicted protein 2 193 - -
Vifa4g03170 200 PRINTS E-class P450 group I signature 133 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS E-class P450 group I signature 143 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 Pfam Cytochrome P450 1 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 Coils Coil 27 47 - -
Vifa4g03170 200 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS P450 superfamily signature 134 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03170 200 SUPERFAMILY Cytochrome P450 1 195 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03170 Vifa-Chr4 1004166045 1004166647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03170 1 197 Cytochrome P450 AT1G13110 50.000 9.13e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03170 K20617 - gmx:100803384 314.694