Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03165 ATGCTACTCATAACTTGTTCCATATTTCTCATCCTTTTTATGCTAATCAAATGGTATTCCAATTCTACAAAACCAAAAAACTCACCTCCTTCTCCACCAAAATTCCCTATAATAGGAAATCTCCATCAACTTGGCCTATTCCCTCACCGCACACTTCAATCTCTAGCTAAACAATATGGCCCTTTCATGCAAATCCATCTTGGTAGTGTACCGGTTCTTGTCATCTCATCACCTGAAGCAGCTAGTGAGATTATGAAAACTCATGATCGCGTCTTTGCAAATCGACCCCAAACTAAACTCTATGACATTCTTTTATATGATTGCAAAGATGTTTCAACAGCCCCATATGGAGAGTATTGGAGACAAATAAGGAGTATATCTGTTTTACATCTTCTCAGTGCTAAAAGGGTTCAATCTCTTCGTGCTGTGAGAGAACAAGAAGTTGGTTTTATGGTGGAGAAAATGAAGCAGTGCTCTTCTGCTTCAGTGCCAGTTAATATAAGTCAATTAGTCTCCACAACTATAAATGATATAGTTTGTAGGGTTGCTCTGGGAAGAAAATACAGTGGTGAAAGTGGGAAGGGGTTTAAAATGTTGTTGATGGATTTTACAGAGTTACTTGGTACTATTGTTGTTGGTGACTATGTTCCTTGGCTTGATTGGTTCACCCATGTTTCTGGGTTTTATGCAAGAGCAAAAAGAGTTGCTAAACGGTTTGATGATCTTTTGGAGGATGTCGTTGAAGATCATATAAGTAAACAGAAAGGAGGTAGTGATTATTCAAGTGCTGAAGAACATGCTGACTTTGTTGATGTTTTGCTTTGGATACAAAGGACAGAATCACTTGGCTTTCCAATTGACAGAACTGTCATAAAAGCTCTGTTATTGGACATGTTTTCTGCTGGTACAGACACAATATCCACCTTACTAGAGTGGACAATGACAGAACTCTTAAAACATCCAAATATCATGAAGAAGTTGCAAGAAGAAGTAAGGAGTGTAGCTTATGATAGAACAAACATAACAGAAGATGATTTGGATAACATGAAATACTTAAAAGCAGTGATTAAAGAAACACTACGATTACATCCCTCGATCCCATTACTAGTCCCTCGAGAAAACCGACAAGATATCAAAGTTAAGGACTACAACATCAAAGCTGGGACAAGAGTAATTATAAATGCTTGGGCCATTGCAAGAGATCCCACATATTGGGATCAACCTGAAGATTTCAAGCCGGAGAGATTCTTGAATAATGAGATAGATGTGAAAGGGAATGATTTCCAATTGATTCCATTTGGAGCAGGGAGAAGAGGTTGTCCAGGGATAGTTTATGCTATGGCTGCCGGTGAAATTGTGTTAGCCAACCTTGTGCATCGGTTTAGTTGGGAATTGCATCGTGGTGGTGCAGGATTTGAAACTTTGGACATGTCTGAAACATTTGGTTTAACCATGCATAGAAAAACTCCTCTTGTAGCAATTGCAACCTATGAAAGAGGGACATGCAAAACACGTCGACATCTATAA 1527 0.387 MLLITCSIFLILFMLIKWYSNSTKPKNSPPSPPKFPIIGNLHQLGLFPHRTLQSLAKQYGPFMQIHLGSVPVLVISSPEAASEIMKTHDRVFANRPQTKLYDILLYDCKDVSTAPYGEYWRQIRSISVLHLLSAKRVQSLRAVREQEVGFMVEKMKQCSSASVPVNISQLVSTTINDIVCRVALGRKYSGESGKGFKMLLMDFTELLGTIVVGDYVPWLDWFTHVSGFYARAKRVAKRFDDLLEDVVEDHISKQKGGSDYSSAEEHADFVDVLLWIQRTESLGFPIDRTVIKALLLDMFSAGTDTISTLLEWTMTELLKHPNIMKKLQEEVRSVAYDRTNITEDDLDNMKYLKAVIKETLRLHPSIPLLVPRENRQDIKVKDYNIKAGTRVIINAWAIARDPTYWDQPEDFKPERFLNNEIDVKGNDFQLIPFGAGRRGCPGIVYAMAAGEIVLANLVHRFSWELHRGGAGFETLDMSETFGLTMHRKTPLVAIATYERGTCKTRRHL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03165 508 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vifa4g03165 508 Gene3D Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 CDD CYP71-like 58 491 - -
Vifa4g03165 508 SUPERFAMILY Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03165 508 PANTHER CYTOCHROME P450 71B11-RELATED 14 496 - -
Vifa4g03165 508 FunFam Cytochrome P450 83B1 15 494 - -
Vifa4g03165 508 Pfam Cytochrome P450 29 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03165 Vifa-Chr4 1002764233 1002765963 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03165 1 496 Cytochrome P450 AT3G48270 50.101 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03165 - - gmx:100819183 608.986