Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03163 ATGCTAGCGATAATCTGTTCCAGTTTTGTGTTTCTTTTTCTTGTAATAAAATTGTATTCCTATTCTTCAGAAACCAAAAACTCACCTCCAAGATTACCTTTAATAGGAAATCTTCATCAACTTGGTTCATTCCCCCACCGTTCTTTTTACGCTCTAGCCAAAAAATATGGTCCTTTCATGCAAATGTATTTTGGTAAAGTTCCTATTCTTGTCATCTCATCAGCTGAAGCAGCACGTGAGATAACCAAAACTCATGATCATGTCTTTGCAAACAGACCCCCCAAGATTAATTACGACATTCTTTTGTATAATTTCAGAGATGTTTCATCTGCTCCATATGGAGAGTATTGGAGACAGTTAAGAAGCATTTGTATGTTGCATCTTCTCAGTGCCAAAAGGGTTAAATCTCTTCGCACTGTGAGAGAGGAAGAACTTGTTTTTATGATGGATAAAATAAGAGACTATTCTTCTAAATCACTGCCTGTGAATTTAAGCGAATTGATTGCGTCAAAAACTAATGATGTAGTTTGTAGGGCTACTTTGGGAAATAAGTATAGTGGTGAAAGTGGAACAGGATTTGCTAAGTTGATGTTGGATTTCACCGAGTTGCTTGGTACTTTTATGTCGAGGAACGTTTCAATAATCCGAAAGGTGATGATGAAGAACAGACTGATTTGGTTGATGTTTTTGCTTTGGATCCAAAGGACTGAATCCCTCGGCTTTCCTATCGATAGAACAACCATAAAGGCTTTGTTACTGGACATGTTTGTTGCGGGTACAGACACCATATCAACTTTGCTAGAGTGGGAAATGTCAGAACTGTTGAAGAATCCACACATGATGAAGAGATTAAAAGAAGAAGCAAGGACAGTGGCTAACGGAAGAGCATACATAACGGAAGACGATTTGAGTAACATGAAATACTTAAAGGCGCTTGTTAAAGAAGCACTACGGATGTATCCTCCGATCCCACTACTAGTCCCTCGAGAATGCAGACAAGATGTGAAAGTAGACGGTTACAACATTAAAGCCGGGACAAGAGTTTTTATCAACGCTTGGGGAATTGCAAGAGATCCACGATATTGGGATCAACCTGATGAGTTCAGGCCAGAGAGATTCTTGGATACTTCGGTGGATGTTAAAGGAATTGATTACCAGTTGATTCCGTTTGGATCGGGGAGAAGAGGTTGTCCTGGACTAGTGTATGCTATGGCTGCTAATGATCTTGTGTTGGCCAACCTTGTGCATCAGTTTGACTGGGAGTTACCTGGTGGTGCTGGGGCCAAGGTCGATATGTCTGAAGCATTTGGTTTTACTGTCCACAGGAAGTTTCCTCTTATGGCATATGCAGCCAGCACTTCCTAA 1365 0.4044 MLAIICSSFVFLFLVIKLYSYSSETKNSPPRLPLIGNLHQLGSFPHRSFYALAKKYGPFMQMYFGKVPILVISSAEAAREITKTHDHVFANRPPKINYDILLYNFRDVSSAPYGEYWRQLRSICMLHLLSAKRVKSLRTVREEELVFMMDKIRDYSSKSLPVNLSELIASKTNDVVCRATLGNKYSGESGTGFAKLMLDFTELLGTFMSRNVSIIRKVMMKNRLIWLMFLLWIQRTESLGFPIDRTTIKALLLDMFVAGTDTISTLLEWEMSELLKNPHMMKRLKEEARTVANGRAYITEDDLSNMKYLKALVKEALRMYPPIPLLVPRECRQDVKVDGYNIKAGTRVFINAWGIARDPRYWDQPDEFRPERFLDTSVDVKGIDYQLIPFGSGRRGCPGLVYAMAANDLVLANLVHQFDWELPGGAGAKVDMSEAFGFTVHRKFPLMAYAASTS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03163 454 CDD CYP71-like 55 446 - -
Vifa4g03163 454 PANTHER CYTOCHROME P450 71B11-RELATED 229 450 - -
Vifa4g03163 454 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 351 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Vifa4g03163 454 Gene3D Cytochrome P450 22 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 FunFam Predicted protein 256 448 - -
Vifa4g03163 454 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 Pfam Cytochrome P450 243 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 Pfam Cytochrome P450 28 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g03163 454 SUPERFAMILY Cytochrome P450 29 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03163 Vifa-Chr4 1002326256 1002327835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03163 28 454 Cytochrome P450 AT3G48270 49.458 2.53e-159 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03163 - - gmx:100819183 497.278