Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03151 ATGCAAGAAATCACACCAATTCACTTCCAAACCACTCGAGTCTTACCCGAATACGATGTGTTTATTCACACTTCCGATGGCACACGCATTCCCGCACACACAAGCATTCTGGCATCGGTGTCGCCGGTTCTCGAGAACATTCTAGATCAACCGCGTAAACACCGAAGCTCCGAAAGAATAATCCAAATCCACGGCGTTCCTTCCACCGCCGCCACCGCTTTCGTCGGCTTCCTCTACTCATCCAGATGCAGTGAGGATGAGATGGACAAATACGGAATCCATCTACTAGCACTATCTCATGTCTACAACGTGCCACAGCTGAAACAGATATGCATCAAAGGCCTATCTCAACGGTTAACCGTGGAAAACGTGGTGGATGTACTCCAACTCGCGAGGCTCTGCGACGCACCGGATCTACGTCTCCGCTGTATGAAGCTTCTGACCAATCACTTCAACACAGTTCAGAGAACTGAAGGGTGGAAGTTTCTGATAAAACACGATCCCTGGCTTGAACTCGACATTCTTCAGTTTATGGATGAAAGCGAAACGAGGAAGGAGAAACTGAGGAGGCATAAGGAGGAGTTTGGGTTGTACGTAGAACTGAGTGAGGCGATGGAATGTCTGGAGCATATATGCACGGAGGGGTGTATTGATGTCGGGCCGTATAACGTGGAGGTTGGCAGAGAGAAGAAACCGTGTAAGAGATTCTCGACGTGTCAAGGTCTTCAGCTTCTGATTCGACACTTTGCTACGTGCAAGAAGAGGGTGAAGGGAGGGTGCTTGAGATGCAAGCGTATGTGGCAGCTCTTCAGGTTGCATTCCTATGTTTGTCAGCAAAATGATTCCTGCAATGTTCCTCTTTGCAGGCAATTTCAATTGAGAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTAGCGAAAAAGGTGGTCTCTGCCAAAGTGATGTTTTCCTTATCTCTTCCTAAGAGGAAAAGGGATGAAGAAGTGAGAGTGACCATAGAAAGTTGTGGAATCAGACATTTTGGATACAATGAATATTGTAACAATCAATGTGTTTCGTGTTGA 1077 0.467 MQEITPIHFQTTRVLPEYDVFIHTSDGTRIPAHTSILASVSPVLENILDQPRKHRSSERIIQIHGVPSTAATAFVGFLYSSRCSEDEMDKYGIHLLALSHVYNVPQLKQICIKGLSQRLTVENVVDVLQLARLCDAPDLRLRCMKLLTNHFNTVQRTEGWKFLIKHDPWLELDILQFMDESETRKEKLRRHKEEFGLYVELSEAMECLEHICTEGCIDVGPYNVEVGREKKPCKRFSTCQGLQLLIRHFATCKKRVKGGCLRCKRMWQLFRLHSYVCQQNDSCNVPLCRQFQLRMEQEKRKDDPKWKLLAKKVVSAKVMFSLSLPKRKRDEEVRVTIESCGIRHFGYNEYCNNQCVSC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03151 358 ProSiteProfiles BTB domain profile. 18 87 IPR000210 GO:0005515
Vifa4g03151 358 SUPERFAMILY POZ domain 18 117 IPR011333 -
Vifa4g03151 358 SMART TAZ_2 198 289 IPR000197 -
Vifa4g03151 358 Gene3D Potassium Channel Kv1.1; Chain A 16 119 IPR011333 -
Vifa4g03151 358 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 331 IPR044513 -
Vifa4g03151 358 SUPERFAMILY TAZ domain 196 292 IPR035898 -
Vifa4g03151 358 Pfam BTB/POZ domain 19 117 IPR000210 GO:0005515
Vifa4g03151 358 FunFam BTB/POZ and TAZ domain-containing protein 2 120 190 - -
Vifa4g03151 358 Pfam TAZ zinc finger 202 288 IPR000197 -
Vifa4g03151 358 SMART BTB_4 18 119 IPR000210 GO:0005515
Vifa4g03151 358 FunFam BTB/POZ and TAZ domain-containing protein 2 191 317 - -
Vifa4g03151 358 Gene3D - 120 193 - -
Vifa4g03151 358 Gene3D TAZ domain 197 317 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03151 Vifa-Chr4 999638012 999640213 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Vifa4g03151 BTB 1.1e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03151 - - cam:101496955 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03151 4 999638012 999640213 Vifa4g03151 4 999638012 999640213 ECH