Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03140 ATGAAGAAGGTCACAGTAATTGCGTCTATTTTCCTCTTCTCCATACTCCGTTTTCAAGAACTCCTACACGTTTCTTCATCGCCTCACTTTTACGGAAACCAGGTTCACGAGGAATCTTCTGGTGGAAAAAGAAATTTAAAACAGGAGCAGGAGAATGCTCCTGAAGTGCGCTGCTCCAGAGATAGAAGTAGGGCTGTGTGGAAAGTTATAGACGAGTATTTAACACCATTTGTGGAGAAAGAAAACTACGAGCTTTCGAAAAAGTGCAGACTTCACCCTGAGAATGATATGTTTAGGGATCAAGAAGAGCATAAAATTTACTTAGACAGAAATGAATGGCGCTGTGGATATTGCAAGAAAAGCTTCCGCGAAGAAAAGTTTATCGATCTGCATTTTGATAAAAGGCACTACAATCTTCTGGATCTAAGTCATGGAAAATGCTTGGCTGATTTATGTGGGGCATTACACTGTGATGCTGCGAAAAATTCCAAGTTCTCTAGAAGCAAGTGTAATCCAGCAGCTGCTGCAAGAAATCGTCACCTATGTGAGAGTCTTGCGGACAGTTGTTTTCCTATAAGCGAGGGTCCGTCAGCAAGCCGCCTTCATGAGGTGTTTCTGCACCAATTTTGTGAAGCTCACTCCTGCTCAGGGAAACATAAACCCTTCTCTAGAGGAGGCAAGGATCAAGGAAGTTTCTTTCGCCTGGCTGTTGGAGCATTGGTCTTGGTTTTACTTCCTGTGTTTTATCTCTTTCTTTATTTGATACAAAGTGATATGAAGGGTCGGACTCAAGAGCTTCGTCGCATCTCTAAAGCTGGATGGAAAGCAAAGCCAGCATGA 840 0.4286 MKKVTVIASIFLFSILRFQELLHVSSSPHFYGNQVHEESSGGKRNLKQEQENAPEVRCSRDRSRAVWKVIDEYLTPFVEKENYELSKKCRLHPENDMFRDQEEHKIYLDRNEWRCGYCKKSFREEKFIDLHFDKRHYNLLDLSHGKCLADLCGALHCDAAKNSKFSRSKCNPAAAARNRHLCESLADSCFPISEGPSASRLHEVFLHQFCEAHSCSGKHKPFSRGGKDQGSFFRLAVGALVLVLLPVFYLFLYLIQSDMKGRTQELRRISKAGWKAKPA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03140 279 PANTHER ZINC FINGER PROTEIN-RELATED 8 277 - -
Vifa4g03140 279 MobiDBLite consensus disorder prediction 33 54 - -
Vifa4g03140 279 MobiDBLite consensus disorder prediction 40 54 - -
Vifa4g03140 279 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03140 Vifa-Chr4 994580551 994583102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03140 38 279 C2H2 Transcription Factor Family AT5G63280 61.066 2.04e-105 305