Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03097 ATGGCCGCCACCACCACCAGCCTAGGCGGAGGCGGAGACGATCGCGTCCTCGCCACGGCTCAACAGATCCTGAAAAGCCTCAAAGCTCCCAAAGAGGATCGCGAAGACATGCTATTGATTTTCTCCACCTTTGATAACCGTCTCTCCGGCATCACTGACCTAATCAACGGCGACGATTCCAAATCCTCCGAAGACGAAGAGCTTGACCGTTTCGAAGCCGCGGAGAAAATCATACTCGATGACTCTTCTACATACACCGAGTCCTCTCGCCAATCGACTTCGCTTTTTGATCCTCCTAATGATCCGGTCGAGTATTTTCTCGCTGTTGATGAGATCATTCACTGGATCGAACATTTCTCGATCTCGCCGCCTGATCATTCGACCGCGAAAACTGATCGGATCATTTTGGATCGCGCTGAGAGCGCGATCCAGCTTGCTATGTCGAGGCTCGAGGATGAGTTTCGTCATGTGCTGATTTGTAATACTATCCCGCCTAACGCTGTTAGCAGATGTAGTACTAACCGGAGGAGTTCACTGTCTTTCAGTTCGCAGGATGGTGGTATAGATGATAATTCTGGGAGTTTTGGTGAGGTAAGTGATGCTGGTTCTAATAGGTTTCATGAACGTGGTGTTAGTCTAGGAGATGATTTGTTTGTGGATTTAGTGCGTCCTGAATCGATTCTGAATCTTAAAGATATTATTGATAGGATGGTTAGGTCTGGTTATGAGAGGGAGTGTCTTCAGGTTTATAGTAGTGTGCGTCGTGATGCTTTGATTGAGTGTTTGACTATTCTGGGTGTTGAGAAGATGAGTATTGAGGAGGTTCAGAAGTTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGCATTGGGTGCAGGCTGTTAAGGCTGTTGTTGGGGTTTTGTTGAGTGGGGAGAAAAGGCTTTGTGATAGTCTTTTTGTTGCCATTTGTAAGAGGTCGCCCGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGAGATGCTTTGCCTGATTTGGAGGAAATGGTTTTGGATGACCTTGTGATCACGGAGGCAAAGGGTGTGCTCAAAGGACTTGGCGAGGCTGTAAAAGGGACATTTGCTGAATTTGAGAATTGTATTCGGCATGAGACTTCAAGAAAGCCGGTTATAACTGGGGATGTTCATCCTTTGCCTCGTTATGTTATGAATTACCTGAAACTGCTCGTTGATTATAGTGATGCTATGGATTCACTTTTGGAAATCAGCGAAGAGGCTCTTTATCACTTTAAGAATGATTTGGGGGGTGAGGTTTCACAGTTAGAGGATTTGTCCCCTTTAGGCCGACAAATACTGTTGTTAATGTCCGAACTTGAGCACAATCTTGAGGAAAAATCAAAACTTTATGAAGACATTGCATTGCAGCAGGTGTTTTTGATGAACAATCTCTATTACCTAATGCGCAAAGTGAAGGACTCGGAACTTAAAGATGTCTTGAGAGAAAAATGGATTCGTAAACGCAGCGTAATGGTACGGCAGTACTCTACAGGATACATTAGAGTCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGCAGGGATTGGAGGGAGCTCTAATAGTGCATCAAAAATGGCTTTGAAGGAGAGGTTCAAGAATTTCAATGCATGTTTTGAAGAAATATACAGGGTTCAGACAGGTTGGAAGGTGCCTGATGAGCAGCTTCGTGAAGAGATGCGAATAGCTATATCTGAGAGGGTGATTCCTGCATACCGCTCATTTGTTGGGAGATTTAGCTGTCAGCTGGAAGGAAGACATTCAAGCAAATACATTAAGTATACGGAAGAGGATCTAGGGGCTTATTTATTACATTTGTTTGAAGGATCCCCTACTGTATTACATCACATAAGGAGAAAGAGTTGA 1908 0.4423 MAATTTSLGGGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSEDEELDRFEAAEKIILDDSSTYTESSRQSTSLFDPPNDPVEYFLAVDEIIHWIEHFSISPPDHSTAKTDRIILDRAESAIQLAMSRLEDEFRHVLICNTIPPNAVSRCSTNRRSSLSFSSQDGGIDDNSGSFGEVSDAGSNRFHERGVSLGDDLFVDLVRPESILNLKDIIDRMVRSGYERECLQVYSSVRRDALIECLTILGVEKMSIEEVQKFEWKSLDEKMKHWVQAVKAVVGVLLSGEKRLCDSLFVAICKRSPEKLFRILDMYEALRDALPDLEEMVLDDLVITEAKGVLKGLGEAVKGTFAEFENCIRHETSRKPVITGDVHPLPRYVMNYLKLLVDYSDAMDSLLEISEEALYHFKNDLGGEVSQLEDLSPLGRQILLLMSELEHNLEEKSKLYEDIALQQVFLMNNLYYLMRKVKDSELKDVLREKWIRKRSVMVRQYSTGYIRVSWSKALSCLKDAGIGGSSNSASKMALKERFKNFNACFEEIYRVQTGWKVPDEQLREEMRIAISERVIPAYRSFVGRFSCQLEGRHSSKYIKYTEEDLGAYLLHLFEGSPTVLHHIRRKS 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03097 635 Coils Coil 450 470 - -
Vifa4g03097 635 Gene3D Exocyst complex component Exo70 86 629 - -
Vifa4g03097 635 Pfam Exo70 exocyst complex subunit 314 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vifa4g03097 635 SUPERFAMILY Cullin repeat-like 99 622 IPR016159 -
Vifa4g03097 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 623 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03097 Vifa-Chr4 989070243 989072234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03097 14 635 EXO70 exocyst subunit family AT5G50380 53.608 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03097 K07195 - gmx:100809716 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03097 4 989070243 989072234 Vifa4g03097 4 989070243 989072234 ECH