Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03093 ATGTCAACATCCATTTGTCACATGTTAATATCACTTCTTCTTTTTGTTTTTCTGCAACACACACTTGCAATTAAACAGTCCTATATTGTATATTTAGGATCACATTCTTTTGGTCCAAATCCTTCATTATTGGATTCTGAATATGTCACAAATTCTCACTATGACTTACTTGGATCTTTCCTTGGAAGTACTGAGAAGGCCAAAGAAGCAATATTTTACTCTTACAATAAATATATAAATGGCTTTGCTGCAATACTTGAAGAAGATGAAGCAAAAGAGATTGCAAAACATCCAAATGTTGTATCAATGTTTTTAAATAAAAGATATGAACTACATACCACCCGATCGTGGAATTTCCTTGGGCTAGAGACGGACCGCGGGTCTGCTAACGATTCAGTATGGAAAAAATCATTGGGTGAAGACATCATTATTGGAAATTTGGACACCGGTGTTTGGCCGGAATCAAAGAGTTTTAGTGATGAAGGATATGGGCCAATTCCAAAGAAGTGGAAAGGAATTTGTCAAGTTACCAAAGGAAATCCAGATAAATTTTATTGCAACAGGAAACTCATTGGAGCAAGATATTTTTCTAAAGGCAATCAGGCAAATTCCGGAGAGGCGAATGTAACCTTTAATAGCGCACGTGACACCGTAGGCCATGGAACACATACTTTATCTACTGCTGGAGGTAATTTTGTTGCTGGAGCAAATGTATTTGGCTTTGGAAATGGAACAGCAAGTGGTGGATCACCGAAAGCGCGAGTTGCAGCCTATAAGGTCTGTTGGGATGGATGTTTTGATGCTGATATTTTGGCTGGTTTTGAAGCTGCCATAAGTGATGGTGTTGATGTACTTTCGGTGTCCTTGGGAGGAAATTTTCCACGAGATTATTCGGAAAGTGCTATTTCCATAGGTTCCTTCCATGCAATTGCCAACAACATCGTTGTTGTGGCGTCTGGAGGAAATTCAGGACCTAAAATATCATCTATAGTCAATGTTGAACCATGGACTTTCACAGTTGCTGCTAGCACAATTGATAGAGACTTCACAAGTTATGTTATTCTTGGTAACAAAAAAACATACAAGGGAGCTAGTCTTTCAGAGTTGGACTTACCACCTAACAAATCATATCCATTGATAAGTGCTGTAGATGCCAAACTTGATAATACGCCTCCCGAACTTGCCTCTATCTGCAAAGAAGGAACTCTTGATCCACAAAAGGTTAAAGGAAAAATATTGGTATGTCTTCGAGGGGATAGTGCTAGAGTTGACAAGGGCGTGCAAGCTTCTCGTGTAGGTGCTATCGGAATGATATTGGCTAACGACGAGGATTCAGGGAATGGAGTTATAGCAGATCCTCATGTGCTTCCCGCTACAAATGTTGGCTTTGCAGATGGCAGTGCCATTTTTAATTACATCAATCGCACAAAGTCTCCTGTGGCTTACATTACTAAAGTTAAAACAGAATTGGGCGTAAAGAACACTCCAACTATAGCTTCATTTTCGTCAAGAGGCCCAAATGACCTTGATGGTAAAATCCTTAAGCCTGACATTACTGCACCCGGCGTTAGCATAATTGCAGCGTATACTCTAGCAAACTCTCCATCGGAACAACCATCTGATAAGCGTAGAATTCCTTTTGTTACCATGTCAGGCACTTCAATGTCATGTCCGCATGTTGCTGGACTTGTCGGACTAGTTAAATCTGTTCATCCTGATTGGAGTCCAGCTGCTATCAAGTCAGCAATCATGACCACAGCAACAACAAAAACCAACAATGGAGTGGAAATATTGGATTCGTCACTAGAAAAGGCAACTCCTTTTGCATATGGTGCCGGGCACGTTCAACCTAATCTTGCAGTGGATCCTGGACTTGTATATGACCTTAATGTTACTGACTATTTGAACTACTTATGTGGTCAGTCATACACCAGTGACCAACTTAAATTATTTTACGGAAAACCTTACACATGTCCAAAATCTTTCAGTTTAGCAGATTTCAATTATCCATCCATCTCAATTTATGAACTTGACGTTTGGAAATCATTGAATGTTACTCGCACCGTTACCAATGTTGGGCCCCCAAGTGAGTATAGAGTGGAGATCCAGGAACCTCCACAATTTCAAGTCACAGTTCAGCCTGAGATTTTAAGATTTAAAGATAAGGGAGAGAAAAAAGAGTTCAAGGTTACAATCACTATGAAGCCAAATAGTACACATATTACTGATTTTGAATTTGGGAAGTTGATTTGGACCGATGGAAAGCATCGTGTTGGGACTCCTATTTCAATAAAGTACACTGATTTGTGA 2310 0.3978 MSTSICHMLISLLLFVFLQHTLAIKQSYIVYLGSHSFGPNPSLLDSEYVTNSHYDLLGSFLGSTEKAKEAIFYSYNKYINGFAAILEEDEAKEIAKHPNVVSMFLNKRYELHTTRSWNFLGLETDRGSANDSVWKKSLGEDIIIGNLDTGVWPESKSFSDEGYGPIPKKWKGICQVTKGNPDKFYCNRKLIGARYFSKGNQANSGEANVTFNSARDTVGHGTHTLSTAGGNFVAGANVFGFGNGTASGGSPKARVAAYKVCWDGCFDADILAGFEAAISDGVDVLSVSLGGNFPRDYSESAISIGSFHAIANNIVVVASGGNSGPKISSIVNVEPWTFTVAASTIDRDFTSYVILGNKKTYKGASLSELDLPPNKSYPLISAVDAKLDNTPPELASICKEGTLDPQKVKGKILVCLRGDSARVDKGVQASRVGAIGMILANDEDSGNGVIADPHVLPATNVGFADGSAIFNYINRTKSPVAYITKVKTELGVKNTPTIASFSSRGPNDLDGKILKPDITAPGVSIIAAYTLANSPSEQPSDKRRIPFVTMSGTSMSCPHVAGLVGLVKSVHPDWSPAAIKSAIMTTATTKTNNGVEILDSSLEKATPFAYGAGHVQPNLAVDPGLVYDLNVTDYLNYLCGQSYTSDQLKLFYGKPYTCPKSFSLADFNYPSISIYELDVWKSLNVTRTVTNVGPPSEYRVEIQEPPQFQVTVQPEILRFKDKGEKKEFKVTITMKPNSTHITDFEFGKLIWTDGKHRVGTPISIKYTDL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03093 769 FunFam Subtilisin-like protease SBT1.5 141 359 - -
Vifa4g03093 769 Pfam PA domain 398 469 IPR003137 -
Vifa4g03093 769 CDD Peptidases_S8_3 109 588 IPR034197 -
Vifa4g03093 769 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Vifa4g03093 769 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Vifa4g03093 769 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vifa4g03093 769 SUPERFAMILY PA domain 405 476 IPR046450 -
Vifa4g03093 769 FunFam subtilisin-like protease SBT1.5 346 490 - -
Vifa4g03093 769 FunFam Subtilisin-like protease SBT1.5 638 767 - -
Vifa4g03093 769 Gene3D - 346 490 - -
Vifa4g03093 769 Pfam Fibronectin type-III domain 666 764 IPR041469 -
Vifa4g03093 769 Pfam Subtilase family 139 612 IPR000209 GO:0006508|GO:0008236
Vifa4g03093 769 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Vifa4g03093 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
Vifa4g03093 769 Gene3D Peptidase S8/S53 domain 141 634 IPR036852 GO:0004252|GO:0006508
Vifa4g03093 769 CDD PA_subtilisin_like 352 483 - -
Vifa4g03093 769 SUPERFAMILY Subtilisin-like 111 625 IPR036852 GO:0004252|GO:0006508
Vifa4g03093 769 ProSiteProfiles Serine proteases, subtilase domain profile. 116 621 - -
Vifa4g03093 769 Gene3D - 638 767 - -
Vifa4g03093 769 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Vifa4g03093 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Vifa4g03093 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 763 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03093 Vifa-Chr4 988155130 988158322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03093 16 767 Subtilisin-like Serine Gene Family AT5G59810 56.053 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03093 - - psat:127074066 1273.84