Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03092 ATGACATCATCTATTTGTCACACGTTAATGCCACTTCTTCTTTTTGTTTTTCTACATGAACATACCCTTGCAATAAAACAGCCCTATATTGTATACTTAGGATCACATTCTTTCGGTTCAAATCCTTCTTCATTTGATTCTGAATTTGCCACAAATTCTCACTATGATTTACTTGGATCTTACGTTGGAAGCATTAAGAAGGCGAAAGAAGCAATATTTTACTCTTACACAAGATATATTAATGGCTTTGCTGCAATACTTGATGAAGATGAAGCAGCTAAAGTTGCAAAGAATCCAAATGTTGTATCAATATTTTTAAATAAAAGATATGAACTACACACGACCCGATCATGGAATTTCCTTGGGTTAGAGACGGACGGTGGATTTACTAATGATTCAGTGTGGAAAAAATCATTGGGTGAAGACATTATTATTGGAAATTTGGACTATGGTGTTTGGCCAGAATCCAAGAGTTTTAGTGATGAAGGGTATGGGCCAATTCCAAAAAAGTGGAAAGGAATTTGTGATGTTACCAAAGGAAATCCAGATAAATTTTATTGCAACAGGAAACTTATTGGAGCAAAATATTTTCACAAAGGCTATCAGGCACGTCTCGGTGCAGCGGCAAATGTAACCTTTAATAGTGCGCGCGACACTGAAGGTCATGGCACACATACTTTATCAACTGCAGGAGGTAATTTTGTTGCTGGAGCAAATGTATTTGGCTTTGGAAATGGAACAGCGAGTGGTGGATCGCCAAAAGCGCGAGTTGCAGCCTATAAGGTCTGTTGGAATGGATGTTTTGATGCTGATATTTTGGCTGGTTTTGAAGCTGCCATAAGTGATGGTTCCTTCCATGCAATTACCAACAACATCATTGTTGTTGCTTCTGGAGGAAATGAAGGACCTAATTTCGGTGGTGAAGATGCAAAACTTGGTGTGAATAATGACATAGCAGCTCAACTTTGTGAAAATAGAAGTCTGGATCCGAAAAAGAAGACGAATGGAAAAATATTGGTGCTATCGGAGTCATTTTGGTTAACAATGCTGGGTTTCTCAACCAATGATCTTTTAGTTGATGCTCAAGTGATTCCATCTTCAAATGTTAACTTAGAAGACGGCTCTAACATTCTTAATTACATCAATCAGACAAAGTTTCCTATGGCTTACATAACTAAAGCTAAAACACAGTTAGGTATAAAGTCAGCTCCATATGTAGCTACTTTTTCATCAAGAGGCCCAAACAACCTTGACCCTTCAATCCTTAAGCCTGATATAATTGCACCAGCCGTCAATATAATTGCAGCTTATACCGGCGGTGTATTTCTAACTATGTCAGGCACTTCATGTCATGCCCTCATGTTGCCGGACTAG 1374 0.3836 MTSSICHTLMPLLLFVFLHEHTLAIKQPYIVYLGSHSFGSNPSSFDSEFATNSHYDLLGSYVGSIKKAKEAIFYSYTRYINGFAAILDEDEAAKVAKNPNVVSIFLNKRYELHTTRSWNFLGLETDGGFTNDSVWKKSLGEDIIIGNLDYGVWPESKSFSDEGYGPIPKKWKGICDVTKGNPDKFYCNRKLIGAKYFHKGYQARLGAAANVTFNSARDTEGHGTHTLSTAGGNFVAGANVFGFGNGTASGGSPKARVAAYKVCWNGCFDADILAGFEAAISDGSFHAITNNIIVVASGGNEGPNFGGEDAKLGVNNDIAAQLCENRSLDPKKKTNGKILVLSESFWLTMLGFSTNDLLVDAQVIPSSNVNLEDGSNILNYINQTKFPMAYITKAKTQLGIKSAPYVATFSSRGPNNLDPSILKPDIIAPAVNIIAAYTGGVFLTMSGTSCHALMLPD 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03092 457 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Vifa4g03092 457 Gene3D - 316 398 - -
Vifa4g03092 457 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 320 450 IPR045051 -
Vifa4g03092 457 ProSiteProfiles Serine proteases, subtilase domain profile. 117 457 - -
Vifa4g03092 457 SUPERFAMILY Subtilisin-like 15 449 IPR036852 GO:0004252|GO:0006508
Vifa4g03092 457 Pfam Subtilase family 140 449 IPR000209 GO:0006508|GO:0008236
Vifa4g03092 457 Pfam Peptidase inhibitor I9 29 113 IPR010259 -
Vifa4g03092 457 Gene3D Peptidase S8/S53 domain 399 449 IPR036852 GO:0004252|GO:0006508
Vifa4g03092 457 Gene3D Peptidase S8/S53 domain 142 283 IPR036852 GO:0004252|GO:0006508
Vifa4g03092 457 FunFam Subtilisin-like protease SBT5.3 18 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03092 Vifa-Chr4 988140099 988142565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03092 23 438 Subtilisin-like Serine Gene Family AT5G59810 46.602 8.70e-138 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03092 - - psat:127074066 510.76