Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03091 ATGACCACAGCAACAACTAAAAACAACATTGGAGGGCCTATACTGGATTCATCGCTCGACAACGCAACTTCTTTTGCTTATGGTTCAGGGCTCATTCAACCTAATCATGCAGTGGATCCTGGACTTATATATGACCTGAATATTACTGATTATTTGAACTATTTATGTGGCCATGGATACAATAGTTCCCAACTTAAAGTGCTCTATGGAAAACCTTACACTTGTCCAAAATCTCTCAGTTTAACAGATTTCAATTATCCATCCATCACAGTTTCTGACTTTAAAGTCGGACAGTCTTTGACTGTTACTCGTACGGTAACCAATGTTGGGTTCCCAAGCAAGTATACAGTGACGATCGAGGCACCCCCGGAATTTCTAGTCGCAGTCGAGCCTAATATATTAAACTTTAAGGATAAGGTTGATTTGGACCGGACGGAAAAACATAGTGTTGGGACTCCTATTACAATAAAGTATCCACATTAG 483 0.3996 MTTATTKNNIGGPILDSSLDNATSFAYGSGLIQPNHAVDPGLIYDLNITDYLNYLCGHGYNSSQLKVLYGKPYTCPKSLSLTDFNYPSITVSDFKVGQSLTVTRTVTNVGFPSKYTVTIEAPPEFLVAVEPNILNFKDKVDLDRTEKHSVGTPITIKYPH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03091 160 Gene3D Peptidase S8/S53 domain 1 51 IPR036852 GO:0004252|GO:0006508
Vifa4g03091 160 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 138 IPR045051 -
Vifa4g03091 160 Gene3D - 55 149 - -
Vifa4g03091 160 Pfam Fibronectin type-III domain 83 139 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03091 Vifa-Chr4 988139405 988140039 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03091 1 147 Subtilisin-like Serine Gene Family AT2G04160 51.678 2.50e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03091 - - mtr:11408228 217.624