Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03090 ATGGCGTCTCTACAACACACAACCGCTTCACTCCACTCCAAACCCATCCCCAAAGCCACAAACACCCTCACCCGAAAACCCATCCTCAGCCTCTCCTTTTCCACCTTCACCCCAAAGCTCAAACTCTCCCTCACCAAACCCCGCCGCTCCACCGGCGGAGCCCTCGGAGCCACAATGTCCTCCGCCGCCGCCTCCAACTACGCCACCGCTTTAGCCGACTTAGCGAAATCAAACAACACCCTCGACGCAACCACCGCCGACGTCGAGAAAATCGAGCAACTTTTCTCTGACCCCAAGGTGTTCGACTATTTCTCCAGCCCAATAATCGAAGACTCCACAAAACGCAAACTCATAACAGAGTTCGCCACCACCTCAGACTTCCAACCACACACAATAAACTTCCTTAACATCCTTATCGACTCGAAGAGGATCGATCTCATAATCGACGTTGTTAACGAGTTTGAATTTGTTTACAACACTATAACTAATACAGAGCTTGTGGTTGTGACTTCGGTTGTGAAGCTGGAGTCACAGCATTTGGCTCAGATTGCAAAACAGGTTCAGAAGCTTACTGGGGCTAAGAAAGTGAGAACTAAGACCCTTCTTGATCCAAGTTTGGTGGCTGGTTTTACTGTCAGGTATGGGAATTCTGGCTCTAAGTTTATTGATATGAGTGTTAAGAAGAAACTTGAGGAAATTGCTGCTCAACTTGATCTGGGTGATATCCAACTTGCTGTATGA 741 0.4818 MASLQHTTASLHSKPIPKATNTLTRKPILSLSFSTFTPKLKLSLTKPRRSTGGALGATMSSAAASNYATALADLAKSNNTLDATTADVEKIEQLFSDPKVFDYFSSPIIEDSTKRKLITEFATTSDFQPHTINFLNILIDSKRIDLIIDVVNEFEFVYNTITNTELVVVTSVVKLESQHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVRYGNSGSKFIDMSVKKKLEEIAAQLDLGDIQLAV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03090 246 Hamap ATP synthase subunit delta [atpD]. 59 239 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Vifa4g03090 246 Gene3D - 63 155 IPR026015 -
Vifa4g03090 246 Coils Coil 74 94 - -
Vifa4g03090 246 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 PRINTS ATP synthase delta subunit signature 212 230 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 Pfam ATP synthase delta (OSCP) subunit 64 237 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 60 163 IPR026015 -
Vifa4g03090 246 PANTHER ATP SYNTHASE DELTA CHAIN 48 238 IPR000711 GO:0015986|GO:0046933
Vifa4g03090 246 NCBIfam ATP synthase F1 subunit delta 64 237 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03090 1 245 Primary Pumps ATPases AT4G09650 54.656 2.42e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03090 K02113 - gmx:100819224 301.982