Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03081 ATGGGAAAAGCATCACGCTGGTTTCGCGGTTTTCTCGGTCTAAAAAAACCGGATTACGCTTCAACCGATCAGAAACCACCCAAAGAGAAACGGAGATGGAGTTTCGTCAAATCATACAGAGAACAACAACAACAACATCACAACAGCCACGTCCACGTCGACAACATTAACAACAACAAACAGGCCATCGCAGTCGCTGCTGCCACCGCCGCCGCTGCGGAGGCCGCCGTAGCCGCTGCTAAAGCCGCTGCCGACGTCGTGAGATTCAATAGCAGTAACGGCATCGTCCGGTTACGCGAACAATGGGCGGCCGTTAAGATCCAAGCCGCTTTTCGAGCAAGTTTGGCGAGGAAGGCACTGCGGGCATTAAAAGGGCTGGTGAAGCTCCAGGCTCTTGTGAGAGGGCACATTGAGAGGAAAAGAACAGCAGAGTGGCTCAAACGGATGCAATCACTTGTGCGGGCACAGGCACGATTTAATGCTGCACGTATCCTGCAAACATCACACTCTAATGTAAAATCATCTACACTCTATCTCCATGGGGGTCCAGCAACACCAGAGAAATCAGAAAGCCCTGTTAGATCTAGGAGCATGAAATCCGAACATTCACCGTTATTCAAGAGAAACGGTTCCAAATCATGTCTCCCATTCAGCGGCAATATATCAGAGAATCAGATAGACGAACAATCATGGAATAGAGTAAAGTCACTGATAAGATCATATAGCAGGAGTGATGAGAAAACTGAAAGGATTGTGGAAATTGATTCGGGAAAACAACACATAATAACCTCGAAGCGTAGAAACCTCTTTCACTCCATAAGTGATACTGATCATTATTATTATAGTCAGAATTTAACTCCTACAAAGGAATCAAAATCTCATCAATCTAGTCAAAGTCAATCATGTGAGGTTCAATCTTATTACAACCCGCATAAACTCAGCGAAGTCGAAGAGAATAGTCCTCAATTTTTATCATCTGCAACTTCAAAAGAGGATGGATACAAAAGAAGCCCTTTTACTCCTACAAAGAGTGATGGATCAAGAAGTTACCTTAGAGGCTATTCTGATTACCCAAGTTACATGGCATATACAGAGTCATCAAAGGCAAAAGTTAGATCCATGAGTGCACCAAAACAAAGGCCTCAACATGAGAAATCTAGTTCCTCTAATAGGTACTCACTGAATGGACATGACATTGCAAGATTGGCAGCACAGAGAAATTCTGCACTGCAAGCAAGTTTTGCAAGTAAAGGGTATCCAGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTGGGGTATAGATAA 1308 0.4434 MGKASRWFRGFLGLKKPDYASTDQKPPKEKRRWSFVKSYREQQQQHHNSHVHVDNINNNKQAIAVAAATAAAAEAAVAAAKAAADVVRFNSSNGIVRLREQWAAVKIQAAFRASLARKALRALKGLVKLQALVRGHIERKRTAEWLKRMQSLVRAQARFNAARILQTSHSNVKSSTLYLHGGPATPEKSESPVRSRSMKSEHSPLFKRNGSKSCLPFSGNISENQIDEQSWNRVKSLIRSYSRSDEKTERIVEIDSGKQHIITSKRRNLFHSISDTDHYYYSQNLTPTKESKSHQSSQSQSCEVQSYYNPHKLSEVEENSPQFLSSATSKEDGYKRSPFTPTKSDGSRSYLRGYSDYPSYMAYTESSKAKVRSMSAPKQRPQHEKSSSSNRYSLNGHDIARLAAQRNSALQASFASKGYPGSGRLDKLGMPVGYR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03081 435 MobiDBLite consensus disorder prediction 315 351 - -
Vifa4g03081 435 PANTHER IQ-DOMAIN 5-RELATED 1 395 - -
Vifa4g03081 435 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Vifa4g03081 435 MobiDBLite consensus disorder prediction 286 305 - -
Vifa4g03081 435 MobiDBLite consensus disorder prediction 413 435 - -
Vifa4g03081 435 MobiDBLite consensus disorder prediction 369 393 - -
Vifa4g03081 435 Pfam Protein of unknown function (DUF4005) 320 400 IPR025064 -
Vifa4g03081 435 MobiDBLite consensus disorder prediction 192 206 - -
Vifa4g03081 435 MobiDBLite consensus disorder prediction 175 211 - -
Vifa4g03081 435 Pfam IQ calmodulin-binding motif 127 141 IPR000048 GO:0005515
Vifa4g03081 435 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Vifa4g03081 435 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Vifa4g03081 435 Gene3D - 99 151 - -
Vifa4g03081 435 MobiDBLite consensus disorder prediction 315 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03081 Vifa-Chr4 985872564 985875118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03081 1 59 IQD Protein Family AT4G23060 44.776 8.22e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03081 - - gmx:100793587 470.314