Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03052 ATGGCTTCAAATATTTGCAAACCTTCTCGTCGCGATCATTCTCTAATAAAAACAACAAAGTGTGCTTCAAAACCTACCCTTTTACTCAAGGACTACCTCAGGGACGACCTGAGTTCATGTTCATCGAGCGGTTTCAAATCATTCCCGCGCCGACAATGCTGCACTGCCGTTGGATTCATCAAGGAAAAAGATCTCAAACTCCAACGCAAGAAGACACTCCCTCGGCGAAGGCCAACCGTAACCGCTCTGCAGAGAGCTTCCGGCGCTGTAATAACTGCCATCAAGTCATTGTCCTCACAAAAGAGTGGTAAATCAAAGAAAGCTTCTACCGGTGTTCTTTCTAGAAGCTTCTCGAGGAAGCTGTTAAGCAGAAGGTTCTGGAGAAAAGCTGTTAAGGAAGAGGGAAGAGAAGATGTAATGAGGTGTAGGAGATCTTTCCGCGAACTTCTTATGCAGGAACGATGTTATAAACCGACGTCGTTCAATGAGGATACCGTTTTCACTCCCAAAAGCATCACCAACCTCTCTTCAGGTTGTTGTAGTAATAGCTGGGGAGAAAGTGAATTCACGTTTTCATCAAAAACTACTTCCTCTGATAGCTCCATAGATAACCTACTTGACGGCGTCACAAACGGCACTCCTCATCGGCACAAGATAGAAGCAGTAACACACGGGGATTGGTCAAACGAGAAGGAACAATTCAGCCCTGTTTCAGTACTAGATTGCCCATTTGAAGATGAAGAAGAGATGAAATCTAATTTCATGATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATACAAAAGACACGACATTTTGAGAACATATCTTCATTGGAGCCATTGGTTTTAGAGAAAAGGATCAAATGCTTAGAAGAACTAGAAGACGAGCCACACAACTATTCTTTAAAACAATGTTCATTGTCAGTAATAGACTCAATTATTGGAGACAGGAAAAACAAGGATGAGCTAAACAGTTTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAAAGCATTGAAGAAAACAGTAATGCTGATTATCCAAAGGATTTTATCCTTTGCAATGTAGTTGATGATTGGGTGCGTGGGAAACCCCAAGAACCGTATTTGGGGTGGGAAGTAAATGAAGGAAGACATGTCTACATTAGTGAGATGGAGAGATGTGAAGAGTGGAAAAACTATGATCAACAAACAGAACAACTTGTTCTTGAGTTGGAAAATGATGTCTTAACTAGTTTGGTTAACGAGATTGTCATTGACCTTGTGATATGCTAG 1290 0.4109 MASNICKPSRRDHSLIKTTKCASKPTLLLKDYLRDDLSSCSSSGFKSFPRRQCCTAVGFIKEKDLKLQRKKTLPRRRPTVTALQRASGAVITAIKSLSSQKSGKSKKASTGVLSRSFSRKLLSRRFWRKAVKEEGREDVMRCRRSFRELLMQERCYKPTSFNEDTVFTPKSITNLSSGCCSNSWGESEFTFSSKTTSSDSSIDNLLDGVTNGTPHRHKIEAVTHGDWSNEKEQFSPVSVLDCPFEDEEEMKSNFMINSFFQGAENKHIQKTRHFENISSLEPLVLEKRIKCLEELEDEPHNYSLKQCSLSVIDSIIGDRKNKDELNSLMINTEKLLFDYLEQSIEENSNADYPKDFILCNVVDDWVRGKPQEPYLGWEVNEGRHVYISEMERCEEWKNYDQQTEQLVLELENDVLTSLVNEIVIDLVIC 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03052 429 PANTHER OS04G0572500 PROTEIN 23 426 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03052 9 426 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 30.591 1.91e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03052 - - tpra:123887284 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03052 4 982678466 982680258 Vifa4g03052 4 982678466 982680258 ECH